GXB: Published Sample Sets

Sample Set	Species	Disease	Sample Source	Sample Count
Blood Transcriptional Profiles in Active and Latent Tuberculosis UK (Training Set) - GSE19439	Homo sapiens	Tuberculosis	Whole Blood	42
Alarmins MRP8 and MRP14 induce stress-tolerance in phagocytes under sterile inflammatory conditions-GSE61477	Homo sapiens	Sterile Inflammation	Monocytes	12
Effect of vitamin D treatment on human monocytes-GSE56490	Homo sapiens	Healthy	Macrophages, Monocytes ...	16
Interleukin-1- and Type I Interferon-Dependent Enhanced Immunogenicity of an NYVAC-HIV-1 Env-Gag-Pol-Nef Vaccine Vector with Dual Deletions of Type I and Type II Interferon-Binding Proteins-GSE65412	Homo sapiens	Vaccination	Monocytes	20
Toll-like receptor triggering of a vitamin D-mediated human antimicrobial response-GSE8921	Homo sapiens	Healthy	Monocytes ...	50
TRAIL Is a Novel Antiviral Protein against Dengue Virus-GSE9378	Homo sapiens	Dengue	Monocytes, B cells ...	10
Innate immune repsonses to TREM-1 activation-GSE9988	Homo sapiens	Healthy	Monocytes	62
Performance comparison of Affymetrix and Illumina microarray technologies-GSE11430	Homo sapiens	Acute coronary syndrome	Macrophages, Monocytes	10
Effect of interferon-gamma on macrophage differentiation and response to Toll-like receptor ligands-GSE11864	Homo sapiens	Healthy	Monocytes	10
Effects of PMN-Ectosomes on human macrophages-GSE14419	Homo sapiens	Healthy	Macrophages, Neutrophils	16
Expression data from human macrophages -GSE16385	Homo sapiens	Healthy	Monocytes	38
Subpopulations of CD163 positive macrophages are classically activated in psoriasis-GSE18686	Homo sapiens	Psoriasis	Macrophages ...	58
Traffic-related Particulate Matter Upregulates Allergic Responses by a Notch-pathway Dependent Mechanism-GSE34025	Homo sapiens	Healthy	Monocytes	16
New insights into key genes and pathways involved in the pathogenesis of HLA-B27-associated acute anterior uveitis-GSE37588	Homo sapiens	Acute anterior uveitis	Monocytes	6
TREM-1 is a novel therapeutic target in Psoriasis-GSE42305	Homo sapiens	Psoriasis	Monocytes	15
Microarray analysis of IL-10 stimulated adherent peripheral blood mononuclear cells-GSE43700	Homo sapiens	Healthy	Monocytes	8
Nanotoxicogenomic study of ZnO and TiO2 responses-GSE39316	Homo sapiens	Healthy	Monocyte-derived Dendriti ...	90
Similarities and differences between macrophage polarized gene profiles-GSE49240	Homo sapiens	Healthy	Monocytes ...	12
PGE2-induced OSM expression-GSE36995	Homo sapiens	Inflammation	Macrophages ...	6
Macrophage Microvesicles Induce Macrophage Differentiation and miR-223 Transfer-GSE41889	Homo sapiens	Healthy	Macrophages, Monocytes ...	24
Gene Expression-Based High Throughput Screening: APL Treatment with Candidate Compounds-GSE976	Homo sapiens	Acute Myeloid Leukemia (A ...	Monocytes, Neutrophils ...	24
Gene expression profiling in pediatric meningococcal sepsis reveals dynamic changes in NK-cell and cytotoxic molecules-GSE11755	Homo sapiens	Sepsis	Monocytes, Lymphocytes ...	41
Human monocyte and dendritic Cell Subtype Gene Arrays-GSE11943	Homo sapiens	Healthy	Dendritic Cells ...	8
Blood Transcriptional Profiles of Active TB (Separated cells)-GSE19443	Homo sapiens	Tuberculosis	CD4 T cells, Monocytes ...	44
Ubiquinol-induced gene expression signatures are translated into reduced erythropoiesis and LDL cholesterol levels in humans-GSE21351	Homo sapiens	Healthy	Monocytes, B cells	6
Deconvoluting Early Post-Transplant Immunity Using Purified Cell Subsets Reveals Functional Networks Not Evident by Whole Blood Analysis-GSE24223	Homo sapiens	Kidney Transplantation	CD4 T cells, Monocytes ...	179
Direct Cell Conversion of Human Fibroblasts to Monocytic phagocytes by Forced Expression of Monocytic Regulatory Network Elements-GSE27304	Homo sapiens	Dermatomyositis Polymyosi ...	Fibroblast, Monocytes	20
mRNA expression profiling of human immune cell subset (Roche)-GSE28490	Homo sapiens	Healthy	CD4 T cells, Monocytes ...	47
mRNA expression profiling of human immune cell subsets (HUG)-GSE28491	Homo sapiens	Healthy	CD4 T cells, Monocytes ...	33
Comparison study between Uremic patient with Healthy control-GSE43484	Homo sapiens	Uremic	Monocytes	6
The effect of cell subset isolation method on gene expression in leukocytes-GSE50008	Homo sapiens	Healthy	CD4 T cells, Monocytes ...	50
Immune Variation Project (ImmVar) [CD14]-GSE56034	Homo sapiens	Healthy	Monocytes	485
Analysis of blood myelomonocytic cells from RCC patients-GSE38424	Homo sapiens	Renal Cell Carcinoma	Monocytes	8
Activation of the JAK/STAT pathway in Behcet’s Disease-GSE61399	Homo sapiens	Behcet Syndrome	CD4 T cells, Monocytes	29
Divergent genome wide transcriptional profiles from immune cell subsets isolated from SLE patients with different ancestral backgrounds-GSE55447	Homo sapiens	Systemic Lupus Erythemato ...	CD4 T cells, Monocytes ...	208
Induction of Dendritic Cell-like Phenotype in Macrophages during Foam Cell Formation-GSE7138	Homo sapiens	Healthy	Macrophages, Monocytes ...	22
Gene expression data from CD14++ CD16- classical monocytes from healthy volunteers and patients with pancreatic ductal adenocarcinoma-GSE60601	Homo sapiens	Pancreatic ductal adenoca ...	Monocytes	12
Comparative analysis of monocytes from healthy donors, patients with metastatic breast cancer, sepsis or tuberculosis-GSE65517	Homo sapiens	Breast Cancer & Bacterial ...	Monocytes	13
Expression data from intermediate monocytes from healthy donors and autoimmune uveitis patients-GSE66936	Homo sapiens	Autoimmune uveitis patien ...	Monocytes	21
Genomic profiles for human peripheral blood T cells, B cells, natural killer cells, monocytes, and polymorphonuclear cells-GSE72642	Homo sapiens	Healthy	Monocytes, Neutrophils ...	18
Restricted Dendritic Cell and Monocyte Progenitors in Human Cord Blood and Bone Marrow-GSE65128	Homo sapiens	Healthy	Monocytes, pDC	36
Human blood monocyte response to IL-17A in culture-GSE54884	Homo sapiens	Healthy	Monocytes	6
Monocytes of patients with familial hypercholesterolemia show alterations in cholesterol metabolism-GSE6054	Homo sapiens	Hypercholesterolemia	Monocytes	23
GM-CSF induced gene-regulation in human monocytes-GSE63662	Homo sapiens	Healthy	Monocytes	6
Treatment of human monocytes with TLR7 or TLR8 agonists-GSE64480	Homo sapiens	Healthy	Monocytes	9
Transcriptional profiling of CD16+ and CD16- peripheral blood monocytes from healthy individuals-GSE16836	Homo sapiens	Healthy	Monocytes	8
Comparison of gene expression profiles between human monocyte subsets-GSE18565	Homo sapiens	Healthy	Monocytes	6
Mycobacterium tuberculosis Chaperonin 60.1 has Bipolar Effects on Human peripheral blood-derived Monocytes-GSE18794	Homo sapiens	Healthy	Monocytes	21
Filaria induced monocyte dysfunction and its reversal following treatment-GSE2135	Homo sapiens	Filariasis	Monocytes	14
Gene expression profiling of the classical (CD14++CD16-), intermediate (CD14++CD16+) and nonclassical (CD14+CD16+) human monocyte subsets-GSE25913	Homo sapiens	Healthy	Monocytes	24
Gene expression profiles of human blood classical monocytes (CD14++CD16-), CD16 positive monocytes (CD14+16++ and CD14++CD16+), and CD1c+ CD19- dendritic cells-GSE34515	Homo sapiens	Healthy	Dendritic Cells ...	9
Transcriptome profiles of human monocyte and dendritic cell subsets-GSE35457	Homo sapiens	Healthy	Dendritic Cells ...	49
Inflammatory Expression Profiles in Monocyte to Macrophage Differentiation amongst Patients with Systemic Lupus Erythematosus and Healthy Controls with and without an Atherosclerosis Phenotype-GSE37356	Homo sapiens	Systemic Lupus Erythemato ...	Macrophages, Monocytes	72
Monocytes and Dendritic cells stimulated by 13 human vaccines and LPS-GSE44721	Homo sapiens	Vaccination	Dendritic Cells ...	128
Tumor-educated circulating monocytes are powerful specific biomarkers for diagnosis of colorectal cancer-GSE47756	Homo sapiens	Colorectal cancer	Monocytes	93
T helper lymphocyte- and monocyte-specific type I interferon (IFN) signatures in autoimmunity and viral infection-GSE51997	Homo sapiens	Autoimmune Diseases	Monocytes, T cells	36
Effect of two weeks erythropoietin treatment on monocyte transcriptomes of cardiorenal patients-GSE17582	Homo sapiens	Cardiorenal Syndrome (CRS ...	Monocytes	48
Genome Wide Gene Expression Study of Circulating Monocytes in human with extremely high vs. low bone mass-GSE7158	Homo sapiens	Healthy	Monocytes	26
Expression data from monocytes of individuals with different collateral flow index CFI-GSE7638	Homo sapiens	Coronary artery disease	Monocytes	160
Leukotriene D4 induces gene expression in human monocytes through cysteinyl leukotriene type I receptor-GSE7807	Homo sapiens	Healthy	Monocytes	8
Gene expression profile during monocytes to macrophage differentiation-GSE8286	Homo sapiens	Healthy	Monocytes	9
Interaction of bone marrow stroma and monocytes: bone marrow stromal cell lines cultured with monocytes-GSE10595	Homo sapiens	Healthy	Monocytes ...	8
Monocyte gene expression profiling in familial combined hyperlipidemia and its modification by atorvastatin treatment-GSE11393	Homo sapiens	Familial combined hyperli ...	Monocytes	9
Microarray analysis of human monocytes infected with Francisella tularensis-GSE12108	Homo sapiens	Healthy	Monocytes	14
Human blood monocyte profile in Ventilator-Associated Pneumonia patients-GSE12838	Homo sapiens	Pneumonia	Monocytes, Neutrophils	60
Quercetin supplementation and CD14+ monocyte gene expression-GSE13899	Homo sapiens	Healthy	Monocytes	6
Homogeneous monocytes and macrophages from hES cells following coculture-free differentiation in M-CSF and IL-3-GSE15791	Homo sapiens	Healthy	Monocytes, HUES-2	9
COPD-Specific Gene Expression Signatures of Alveolar Macrophages as well as Peripheral Blood Monocytes Overlap and Correlate with Lung Function-GSE16972	Homo sapiens	Chronic Obstructive Pulmo ...	Macrophages, Monocytes	12
Loss-of-function mutations in REP-1 affect intracellular vesicle transport in fibroblasts and monocytes of CHM patients-GSE17549	Homo sapiens	Choroideremia	Fibroblast, Monocytes	15
Genome-wide analysis of monocytes and T cells' response to interferon beta-GSE34627	Homo sapiens	Healthy	Monocytes, T cells	12
Highly pathogenic influenza virus inhibit Inflammatory Responses in Monocytes via Activation of the Rar-Related Orphan Receptor Alpha (RORalpa)-GSE35283	Homo sapiens	Healthy	Monocytes	12
Influenza virus A infected monocytes-GSE35473	Homo sapiens	Healthy	Monocytes	6
Gene expression profile of human monocytes stimulated with all-trans retinoic acid (ATRA) or 1,25a-dihydroxyvitamin D3 (1,25D3)-GSE46268	Homo sapiens	Healthy	Monocytes	12
Transcriptome analysis of blood monocytes from sepsis patients-GSE46955	Homo sapiens	Sepsis	Monocytes	44
Transcriptome analysis of HIV-infected peripheral blood monocytes-GSE50011	Homo sapiens	HIV	Monocytes	86
Gene expression profiles in T-lymphocytes and Monocytes of participants of the Tour de France 2005-GSE5105	Homo sapiens	Healthy	Monocytes	66
Effects of exercise on gene expression level in human monocytes-GSE51835	Homo sapiens	Healthy	Monocytes	24
Longitudinal comparison of monocytes from an HIV viremic vs avirmeic state-GSE5220	Homo sapiens	HIV	Monocytes	16
Expression data from monocytes and monocyte derived macrophages-GSE52647	Homo sapiens	Healthy	Monocytes	12
Transcriptome analysis of primary monocytes from HIV+ patients with differential responses to therapy-GSE52900	Homo sapiens	HIV	Monocytes	14
Cell Specific Expression in Trauma-Related Human T-Cell and Monocyte Pathways-GSE5580	Homo sapiens	Trauma	Leukocytes, Monocytes ...	42
Transcriptomics of human monocytes-GSE56045	Homo sapiens	Healthy	Monocytes	1202
Monocyte vs Macrophage Study-GSE22373	Homo sapiens	Healthy	Macrophages, Monocytes	6
Monocyte gene expression patterns distinguish subjects with and without atherosclerosis-GSE23746	Homo sapiens	Atherosclerosis	Monocytes	95
Cooperative and redundant signaling of leukotriene B4 and leukotriene D4 in human monocytes-GSE24869	Homo sapiens	Healthy	Monocytes	10
cMyb and vMyb in human monocytes-GSE2816	Homo sapiens	Healthy	Monocytes	6
Temporal transcriptional changes in human monocytes following acute myocardial infarction: The GerMIFs monocyte expression study-GSE28454	Homo sapiens	Acute Myocardial Infarcti ...	Monocytes	76
Changes in gene expression profiles in patients with 5q- syndrome in CD14+ monocytes caused by lenalidomide treatment-GSE31460	Homo sapiens	5q-Syndrome	Monocytes	17
Genome-wide analysis of lupus immune complex stimulation of purified CD14+ monocytes and how this response is regulated by C1q-GSE32278	Homo sapiens	Healthy	Monocytes	8
Transcriptome analysis of circulating monocytes in obese patients before and three months after bariatric surgery-GSE32575	Homo sapiens	Obesity	Monocytes	48
CD4 on human monocytes -GSE32939	Homo sapiens	Healthy	Monocytes	6
Peripheral Blood Monocyte Gene Expression in Recent-Onset Type 1 Diabetes-GSE33440	Homo sapiens	Type 1 Diabetes	Monocytes	22
Human monocyte activation with NOD2L vs. TLR2/1L-GSE34156	Homo sapiens	Healthy	Monocytes	45
Bacillus anthracis' lethal toxin induces broad transcriptional responses in human peripheral monocyte-GSE34407	Homo sapiens	Healthy	Monocytes	8
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