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Clinical

Transcriptome analysis of circulating monocytes in obese patients before and three months after bariatric surgery-GSE32575

Purpose

Low-grade chronic inflammation plays an important role in the development of obesity and obesity-associated disorders such as insulin resistance, type 2 diabetes, the metabolic syndrome and atherosclerosis. One possible link between obesity and inflammation is the enhanced activation of circulating monocytes making them more prone to infiltration into the adipose and vascular tissues of obese persons. Furthermore, weight loss after bariatric surgery is associated with less inflammation. Transcriptome analysis of circulating monocytes from control and obese patients before and after bariatric surgery will potentially provide insights into the pathophysiology of obesity and associated disorders and supply biomarkers for diagnostic purpose.

Hypothesis

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Experimental Design

Samples consisted of CD14+ monocytes from 6 lean controls and 18 morbidly obese patients before and three months after bariatric surgery. The 6 lean controls were also used to make 6 control pools.

Experimental Variables

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Controls

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Methods

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Additional Information

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Microarray
Illumina HumanWG-6 v2
48 Samples Loaded: 48
Human (Homo sapiens)
Monocytes
Obesity
Sample Set Spreadsheet
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Samples Preview
Sample ID Gender !Sample_title cell type disease state
GSM807339 female Monocyte_lean_rep1 CD14+ monocytes lean
GSM807340 female Monocyte_lean_rep2 CD14+ monocytes lean
GSM807341 female Monocyte_lean_rep3 CD14+ monocytes lean
GSM807342 female Monocyte_lean_rep4 CD14+ monocytes lean
GSM807343 female Monocyte_lean_rep5 CD14+ monocytes lean
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Raw Signal
Raw Signal
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Clinical Datasource
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Samples Viewer / Editor

All fields are editable except the "Sample ID" column. To edit a cell, click within the cell. To edit a "date" cell, click on the calendar icon. To cancel an edit, press the ESC key.

Sample ID Gender !Sample Title Cell type Disease state
GSM807339
female
Monocyte_lean_rep1
CD14+ monocytes
lean
GSM807340
female
Monocyte_lean_rep2
CD14+ monocytes
lean
GSM807341
female
Monocyte_lean_rep3
CD14+ monocytes
lean
GSM807342
female
Monocyte_lean_rep4
CD14+ monocytes
lean
GSM807343
female
Monocyte_lean_rep5
CD14+ monocytes
lean
GSM807344
female
Monocyte_lean_rep6
CD14+ monocytes
lean
GSM807345
female
Monocyte_lean_pool1
CD14+ monocytes
lean
GSM807346
female
Monocyte_lean_pool2
CD14+ monocytes
lean
GSM807347
female
Monocyte_lean_pool3
CD14+ monocytes
lean
GSM807348
female
Monocyte_lean_pool4
CD14+ monocytes
lean
GSM807349
female
Monocyte_lean_pool5
CD14+ monocytes
lean
GSM807350
female
Monocyte_lean_pool6
CD14+ monocytes
lean
GSM807351
female
Monocyte_obese_before_bariatric_surgery_rep1
CD14+ monocytes
obese before bariatric surgery
GSM807352
female
Monocyte_obese_before_bariatric_surgery_rep2
CD14+ monocytes
obese before bariatric surgery
GSM807353
female
Monocyte_obese_before_bariatric_surgery_rep3
CD14+ monocytes
obese before bariatric surgery
GSM807354
female
Monocyte_obese_before_bariatric_surgery_rep4
CD14+ monocytes
obese before bariatric surgery
GSM807355
female
Monocyte_obese_before_bariatric_surgery_rep5
CD14+ monocytes
obese before bariatric surgery
GSM807356
female
Monocyte_obese_before_bariatric_surgery_rep6
CD14+ monocytes
obese before bariatric surgery
GSM807357
female
Monocyte_obese_before_bariatric_surgery_rep7
CD14+ monocytes
obese before bariatric surgery
GSM807358
female
Monocyte_obese_before_bariatric_surgery_rep8
CD14+ monocytes
obese before bariatric surgery
GSM807359
female
Monocyte_obese_before_bariatric_surgery_rep9
CD14+ monocytes
obese before bariatric surgery
GSM807360
female
Monocyte_obese_before_bariatric_surgery_rep10
CD14+ monocytes
obese before bariatric surgery
GSM807361
female
Monocyte_obese_before_bariatric_surgery_rep11
CD14+ monocytes
obese before bariatric surgery
GSM807362
female
Monocyte_obese_before_bariatric_surgery_rep12
CD14+ monocytes
obese before bariatric surgery
GSM807363
female
Monocyte_obese_before_bariatric_surgery_rep13
CD14+ monocytes
obese before bariatric surgery
GSM807364
female
Monocyte_obese_before_bariatric_surgery_rep14
CD14+ monocytes
obese before bariatric surgery
GSM807365
female
Monocyte_obese_before_bariatric_surgery_rep15
CD14+ monocytes
obese before bariatric surgery
GSM807366
female
Monocyte_obese_before_bariatric_surgery_rep16
CD14+ monocytes
obese before bariatric surgery
GSM807367
female
Monocyte_obese_before_bariatric_surgery_rep17
CD14+ monocytes
obese before bariatric surgery
GSM807368
female
Monocyte_obese_before_bariatric_surgery_rep18
CD14+ monocytes
obese before bariatric surgery
GSM807369
female
Monocyte_obese_after_bariatric_surgery_rep1
CD14+ monocytes
obese after bariatric surgery
GSM807370
female
Monocyte_obese_after_bariatric_surgery_rep2
CD14+ monocytes
obese after bariatric surgery
GSM807371
female
Monocyte_obese_after_bariatric_surgery_rep3
CD14+ monocytes
obese after bariatric surgery
GSM807372
female
Monocyte_obese_after_bariatric_surgery_rep4
CD14+ monocytes
obese after bariatric surgery
GSM807373
female
Monocyte_obese_after_bariatric_surgery_rep5
CD14+ monocytes
obese after bariatric surgery
GSM807374
female
Monocyte_obese_after_bariatric_surgery_rep6
CD14+ monocytes
obese after bariatric surgery
GSM807375
female
Monocyte_obese_after_bariatric_surgery_rep7
CD14+ monocytes
obese after bariatric surgery
GSM807376
female
Monocyte_obese_after_bariatric_surgery_rep8
CD14+ monocytes
obese after bariatric surgery
GSM807377
female
Monocyte_obese_after_bariatric_surgery_rep9
CD14+ monocytes
obese after bariatric surgery
GSM807378
female
Monocyte_obese_after_bariatric_surgery_rep10
CD14+ monocytes
obese after bariatric surgery
GSM807379
female
Monocyte_obese_after_bariatric_surgery_rep11
CD14+ monocytes
obese after bariatric surgery
GSM807380
female
Monocyte_obese_after_bariatric_surgery_rep12
CD14+ monocytes
obese after bariatric surgery
GSM807381
female
Monocyte_obese_after_bariatric_surgery_rep13
CD14+ monocytes
obese after bariatric surgery
GSM807382
female
Monocyte_obese_after_bariatric_surgery_rep14
CD14+ monocytes
obese after bariatric surgery
GSM807383
female
Monocyte_obese_after_bariatric_surgery_rep15
CD14+ monocytes
obese after bariatric surgery
GSM807384
female
Monocyte_obese_after_bariatric_surgery_rep16
CD14+ monocytes
obese after bariatric surgery
GSM807385
female
Monocyte_obese_after_bariatric_surgery_rep17
CD14+ monocytes
obese after bariatric surgery
GSM807386
female
Monocyte_obese_after_bariatric_surgery_rep18
CD14+ monocytes
obese after bariatric surgery

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