Transcriptome analysis of circulating monocytes in obese patients before and three months after bariatric surgery-GSE32575
Low-grade chronic inflammation plays an important role in the development of obesity and obesity-associated disorders such as insulin resistance, type 2 diabetes, the metabolic syndrome and atherosclerosis. One possible link between obesity and inflammation is the enhanced activation of circulating monocytes making them more prone to infiltration into the adipose and vascular tissues of obese persons. Furthermore, weight loss after bariatric surgery is associated with less inflammation. Transcriptome analysis of circulating monocytes from control and obese patients before and after bariatric surgery will potentially provide insights into the pathophysiology of obesity and associated disorders and supply biomarkers for diagnostic purpose.
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Samples consisted of CD14+ monocytes from 6 lean controls and 18 morbidly obese patients before and three months after bariatric surgery. The 6 lean controls were also used to make 6 control pools.
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Sample ID | Gender | !Sample_title | cell type | disease state |
---|---|---|---|---|
GSM807339 | female | Monocyte_lean_rep1 | CD14+ monocytes | lean |
GSM807340 | female | Monocyte_lean_rep2 | CD14+ monocytes | lean |
GSM807341 | female | Monocyte_lean_rep3 | CD14+ monocytes | lean |
GSM807342 | female | Monocyte_lean_rep4 | CD14+ monocytes | lean |
GSM807343 | female | Monocyte_lean_rep5 | CD14+ monocytes | lean |
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Sample ID | Gender | !Sample Title | Cell type | Disease state |
---|---|---|---|---|
GSM807339 | female |
Monocyte_lean_rep1 |
CD14+ monocytes |
lean |
GSM807340 | female |
Monocyte_lean_rep2 |
CD14+ monocytes |
lean |
GSM807341 | female |
Monocyte_lean_rep3 |
CD14+ monocytes |
lean |
GSM807342 | female |
Monocyte_lean_rep4 |
CD14+ monocytes |
lean |
GSM807343 | female |
Monocyte_lean_rep5 |
CD14+ monocytes |
lean |
GSM807344 | female |
Monocyte_lean_rep6 |
CD14+ monocytes |
lean |
GSM807345 | female |
Monocyte_lean_pool1 |
CD14+ monocytes |
lean |
GSM807346 | female |
Monocyte_lean_pool2 |
CD14+ monocytes |
lean |
GSM807347 | female |
Monocyte_lean_pool3 |
CD14+ monocytes |
lean |
GSM807348 | female |
Monocyte_lean_pool4 |
CD14+ monocytes |
lean |
GSM807349 | female |
Monocyte_lean_pool5 |
CD14+ monocytes |
lean |
GSM807350 | female |
Monocyte_lean_pool6 |
CD14+ monocytes |
lean |
GSM807351 | female |
Monocyte_obese_before_bariatric_surgery_rep1 |
CD14+ monocytes |
obese before bariatric surgery |
GSM807352 | female |
Monocyte_obese_before_bariatric_surgery_rep2 |
CD14+ monocytes |
obese before bariatric surgery |
GSM807353 | female |
Monocyte_obese_before_bariatric_surgery_rep3 |
CD14+ monocytes |
obese before bariatric surgery |
GSM807354 | female |
Monocyte_obese_before_bariatric_surgery_rep4 |
CD14+ monocytes |
obese before bariatric surgery |
GSM807355 | female |
Monocyte_obese_before_bariatric_surgery_rep5 |
CD14+ monocytes |
obese before bariatric surgery |
GSM807356 | female |
Monocyte_obese_before_bariatric_surgery_rep6 |
CD14+ monocytes |
obese before bariatric surgery |
GSM807357 | female |
Monocyte_obese_before_bariatric_surgery_rep7 |
CD14+ monocytes |
obese before bariatric surgery |
GSM807358 | female |
Monocyte_obese_before_bariatric_surgery_rep8 |
CD14+ monocytes |
obese before bariatric surgery |
GSM807359 | female |
Monocyte_obese_before_bariatric_surgery_rep9 |
CD14+ monocytes |
obese before bariatric surgery |
GSM807360 | female |
Monocyte_obese_before_bariatric_surgery_rep10 |
CD14+ monocytes |
obese before bariatric surgery |
GSM807361 | female |
Monocyte_obese_before_bariatric_surgery_rep11 |
CD14+ monocytes |
obese before bariatric surgery |
GSM807362 | female |
Monocyte_obese_before_bariatric_surgery_rep12 |
CD14+ monocytes |
obese before bariatric surgery |
GSM807363 | female |
Monocyte_obese_before_bariatric_surgery_rep13 |
CD14+ monocytes |
obese before bariatric surgery |
GSM807364 | female |
Monocyte_obese_before_bariatric_surgery_rep14 |
CD14+ monocytes |
obese before bariatric surgery |
GSM807365 | female |
Monocyte_obese_before_bariatric_surgery_rep15 |
CD14+ monocytes |
obese before bariatric surgery |
GSM807366 | female |
Monocyte_obese_before_bariatric_surgery_rep16 |
CD14+ monocytes |
obese before bariatric surgery |
GSM807367 | female |
Monocyte_obese_before_bariatric_surgery_rep17 |
CD14+ monocytes |
obese before bariatric surgery |
GSM807368 | female |
Monocyte_obese_before_bariatric_surgery_rep18 |
CD14+ monocytes |
obese before bariatric surgery |
GSM807369 | female |
Monocyte_obese_after_bariatric_surgery_rep1 |
CD14+ monocytes |
obese after bariatric surgery |
GSM807370 | female |
Monocyte_obese_after_bariatric_surgery_rep2 |
CD14+ monocytes |
obese after bariatric surgery |
GSM807371 | female |
Monocyte_obese_after_bariatric_surgery_rep3 |
CD14+ monocytes |
obese after bariatric surgery |
GSM807372 | female |
Monocyte_obese_after_bariatric_surgery_rep4 |
CD14+ monocytes |
obese after bariatric surgery |
GSM807373 | female |
Monocyte_obese_after_bariatric_surgery_rep5 |
CD14+ monocytes |
obese after bariatric surgery |
GSM807374 | female |
Monocyte_obese_after_bariatric_surgery_rep6 |
CD14+ monocytes |
obese after bariatric surgery |
GSM807375 | female |
Monocyte_obese_after_bariatric_surgery_rep7 |
CD14+ monocytes |
obese after bariatric surgery |
GSM807376 | female |
Monocyte_obese_after_bariatric_surgery_rep8 |
CD14+ monocytes |
obese after bariatric surgery |
GSM807377 | female |
Monocyte_obese_after_bariatric_surgery_rep9 |
CD14+ monocytes |
obese after bariatric surgery |
GSM807378 | female |
Monocyte_obese_after_bariatric_surgery_rep10 |
CD14+ monocytes |
obese after bariatric surgery |
GSM807379 | female |
Monocyte_obese_after_bariatric_surgery_rep11 |
CD14+ monocytes |
obese after bariatric surgery |
GSM807380 | female |
Monocyte_obese_after_bariatric_surgery_rep12 |
CD14+ monocytes |
obese after bariatric surgery |
GSM807381 | female |
Monocyte_obese_after_bariatric_surgery_rep13 |
CD14+ monocytes |
obese after bariatric surgery |
GSM807382 | female |
Monocyte_obese_after_bariatric_surgery_rep14 |
CD14+ monocytes |
obese after bariatric surgery |
GSM807383 | female |
Monocyte_obese_after_bariatric_surgery_rep15 |
CD14+ monocytes |
obese after bariatric surgery |
GSM807384 | female |
Monocyte_obese_after_bariatric_surgery_rep16 |
CD14+ monocytes |
obese after bariatric surgery |
GSM807385 | female |
Monocyte_obese_after_bariatric_surgery_rep17 |
CD14+ monocytes |
obese after bariatric surgery |
GSM807386 | female |
Monocyte_obese_after_bariatric_surgery_rep18 |
CD14+ monocytes |
obese after bariatric surgery |
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