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Clinical

Expression data from monocytes of individuals with different collateral flow index CFI-GSE7638

Purpose

Using peripheral blood monocytes to identify marker genes for an extensively grown coronary collateral circulation.

Hypothesis

--

Experimental Design

Collateral flow index (CFI) was obtained invasively by angioplasty pressure sensor guidewire, a group of patients with coronary artery disease CAD and a group without CAD were selected for peripheral monocyte isolation, RNA extraction and hybridization on Affymetrix microarrays.

Experimental Variables

--

Controls

--

Methods

--

Additional Information
  • Meier P, Antonov J, Zbinden R, Kuhn A et al. Non-invasive gene-expression-based detection of well-developed collateral function in individuals with and without coronary artery disease. Heart 2009 Jun;95(11):900-8. PMID: 18728069
  • Microarray
    Affymetrix HG-U133A
    160 Samples Loaded: 160
    Human (Homo sapiens)
    Monocytes
    Coronary artery disease
    Sample Set Spreadsheet
    Please log in in order to upload files.
    Samples Preview
    Sample ID !Sample_title Age Gender Collateral flow index CAD_category
    GSM184666 NoCAD_replicate1 47 men 0.174 NoCAD
    GSM184667 NoCAD_replicate2 61 women 0.0918 NoCAD
    GSM184668 NoCAD_replicate3 49 men 0.13924 NoCAD
    GSM184669 CAD_replicate80 58 men 0.22 CAD
    GSM184670 CAD_replicate81 70 women 0.67 CAD
    Please log in in order to upload files.
    File
    Log2 Transformed
    Raw Signal
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    Samples Viewer / Editor

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    Sample ID !Sample Title Age Gender Collateral flow index CAD Category
    GSM184666
    NoCAD_replicate1
    47
    men
    0.174
    NoCAD
    GSM184667
    NoCAD_replicate2
    61
    women
    0.0918
    NoCAD
    GSM184668
    NoCAD_replicate3
    49
    men
    0.13924
    NoCAD
    GSM184669
    CAD_replicate80
    58
    men
    0.22
    CAD
    GSM184670
    CAD_replicate81
    70
    women
    0.67
    CAD
    GSM184671
    NoCAD_replicate45
    64
    men
    0.24
    NoCAD
    GSM184672
    CAD_replicate82
    72
    women
    0.31
    CAD
    GSM184673
    CAD_replicate83
    53
    men
    0.233
    CAD
    GSM184674
    CAD_replicate1
    54
    men
    0.047
    CAD
    GSM184675
    CAD_replicate2
    36
    men
    0.035
    CAD
    GSM184676
    CAD_replicate3
    76
    men
    0.206
    CAD
    GSM184677
    CAD_replicate84
    57
    men
    0.231
    CAD
    GSM184678
    CAD_replicate4
    67
    women
    0.083
    CAD
    GSM184679
    NoCAD_replicate46
    66
    women
    0.338
    NoCAD
    GSM184680
    CAD_replicate85
    46
    men
    0.343
    CAD
    GSM184681
    NoCAD_replicate4
    64
    women
    0.139
    NoCAD
    GSM184682
    NoCAD_replicate5
    67
    women
    0.091
    NoCAD
    GSM184683
    CAD_replicate86
    69
    men
    0.253
    CAD
    GSM184684
    NoCAD_replicate6
    71
    women
    0.11428
    NoCAD
    GSM184685
    NoCAD_replicate7
    54
    men
    0.1935
    NoCAD
    GSM184686
    NoCAD_replicate8
    52
    men
    0.087
    NoCAD
    GSM184687
    NoCAD_replicate9
    58
    men
    0.2046
    NoCAD
    GSM184688
    NoCAD_replicate10
    55
    men
    0.2021
    NoCAD
    GSM184689
    NoCAD_replicate11
    77
    men
    0.104477
    NoCAD
    GSM184690
    CAD_replicate5
    64
    men
    0.0769
    CAD
    GSM184691
    CAD_replicate6
    65
    women
    0.173333333333333
    CAD
    GSM184692
    CAD_replicate87
    53
    women
    0.254237288135593
    CAD
    GSM184693
    CAD_replicate88
    61
    men
    0.248
    CAD
    GSM184694
    NoCAD_replicate12
    63
    men
    0.1863
    NoCAD
    GSM184695
    NoCAD_replicate13
    76
    men
    0.036
    NoCAD
    GSM184696
    CAD_replicate7
    54
    women
    0.0345
    CAD
    GSM184697
    NoCAD_replicate14
    63
    women
    0.1764
    NoCAD
    GSM184698
    NoCAD_replicate15
    64
    men
    0.1887
    NoCAD
    GSM184699
    CAD_replicate89
    63
    men
    0.6771
    CAD
    GSM184700
    CAD_replicate8
    60
    men
    0.1937
    CAD
    GSM184701
    CAD_replicate9
    69
    women
    0.137931034482759
    CAD
    GSM184702
    CAD_replicate10
    55
    men
    0.163636363636364
    CAD
    GSM184703
    CAD_replicate90
    53
    men
    0.219814241486068
    CAD
    GSM184704
    CAD_replicate91
    58
    men
    0.265060240963855
    CAD
    GSM184705
    CAD_replicate11
    57
    women
    0.160409556313993
    CAD
    GSM184706
    CAD_replicate12
    60
    men
    0.1485
    CAD
    GSM184707
    CAD_replicate92
    48
    men
    0.2784
    CAD
    GSM184708
    CAD_replicate93
    66
    men
    0.2958
    CAD
    GSM184709
    CAD_replicate94
    50
    men
    0.3691
    CAD
    GSM184710
    CAD_replicate13
    61
    women
    0.14607
    CAD
    GSM184711
    NoCAD_replicate16
    39
    women
    0.2
    NoCAD
    GSM184712
    CAD_replicate95
    59
    men
    0.28144
    CAD
    GSM184713
    CAD_replicate96
    54
    men
    0.387862796833773
    CAD
    GSM184714
    CAD_replicate14
    82
    men
    0.182432432432432
    CAD
    GSM184715
    CAD_replicate15
    66
    men
    0.169811320754717
    CAD
    GSM184716
    NoCAD_replicate17
    52
    men
    0.195652173913043
    NoCAD
    GSM184717
    NoCAD_replicate18
    71
    women
    0.151785714285714
    NoCAD
    GSM184718
    CAD_replicate16
    45
    men
    0.086
    CAD
    GSM184719
    CAD_replicate17
    58
    women
    0.184
    CAD
    GSM184720
    CAD_replicate18
    44
    men
    0.0954
    CAD
    GSM184721
    CAD_replicate19
    51
    men
    0.166666
    CAD
    GSM184722
    CAD_replicate20
    68
    women
    0.0112
    CAD
    GSM184723
    NoCAD_replicate19
    57
    women
    0.18012
    NoCAD
    GSM184724
    CAD_replicate21
    61
    men
    0.0927835
    CAD
    GSM184725
    NoCAD_replicate20
    77
    women
    0.07958
    NoCAD
    GSM184726
    NoCAD_replicate21
    72
    men
    0.154
    NoCAD
    GSM184727
    NoCAD_replicate22
    47
    men
    0.07407
    NoCAD
    GSM184728
    CAD_replicate22
    70
    men
    0.1
    CAD
    GSM184729
    CAD_replicate23
    63
    men
    0.0557377049180328
    CAD
    GSM184730
    CAD_replicate24
    57
    women
    0.0294117647058824
    CAD
    GSM184731
    CAD_replicate25
    64
    men
    0.119741100323625
    CAD
    GSM184732
    CAD_replicate26
    74
    women
    0.0660377358490566
    CAD
    GSM184733
    CAD_replicate27
    70
    men
    0.162337662337662
    CAD
    GSM184734
    CAD_replicate97
    75
    women
    0.341463414634146
    CAD
    GSM184735
    NoCAD_replicate23
    65
    men
    0.0355029585798817
    NoCAD
    GSM184736
    CAD_replicate28
    65
    men
    0.0865384615384615
    CAD
    GSM184737
    NoCAD_replicate24
    57
    women
    0.134177215189873
    NoCAD
    GSM184738
    NoCAD_replicate25
    44
    men
    0.108108108108108
    NoCAD
    GSM184739
    CAD_replicate29
    58
    men
    0.160349854227405
    CAD
    GSM184740
    CAD_replicate30
    59
    men
    0.111111111111111
    CAD
    GSM184741
    CAD_replicate98
    79
    men
    0.22727
    CAD
    GSM184742
    CAD_replicate31
    55
    men
    0.1899
    CAD
    GSM184743
    CAD_replicate32
    47
    women
    0.1412
    CAD
    GSM184744
    CAD_replicate33
    63
    men
    0.1172
    CAD
    GSM184745
    CAD_replicate34
    75
    men
    0.113636
    CAD
    GSM184746
    CAD_replicate35
    76
    women
    0.11737
    CAD
    GSM184747
    CAD_replicate36
    60
    men
    0.132183908045977
    CAD
    GSM184748
    CAD_replicate37
    78
    men
    0.177944862155388
    CAD
    GSM184749
    CAD_replicate38
    63
    women
    0.118343195266272
    CAD
    GSM184750
    CAD_replicate39
    55
    men
    0.093167701863354
    CAD
    GSM184751
    NoCAD_replicate47
    72
    women
    0.225806451612903
    NoCAD
    GSM184752
    CAD_replicate40
    65
    men
    0.12280701754386
    CAD
    GSM184753
    CAD_replicate41
    75
    men
    0.0984126984126984
    CAD
    GSM184754
    CAD_replicate42
    60
    men
    0.0781893004115226
    CAD
    GSM184755
    CAD_replicate99
    53
    men
    0.217142857142857
    CAD
    GSM184756
    CAD_replicate43
    50
    men
    0.181372549019608
    CAD
    GSM184757
    CAD_replicate44
    71
    men
    0.121387283236994
    CAD
    GSM184758
    CAD_replicate45
    67
    men
    0.163841807909605
    CAD
    GSM184759
    CAD_replicate46
    76
    men
    0.177177177177177
    CAD
    GSM184760
    CAD_replicate100
    74
    men
    0.263803680981595
    CAD
    GSM184761
    CAD_replicate47
    50
    men
    0.103244837758112
    CAD
    GSM184762
    CAD_replicate48
    69
    men
    0.12442
    CAD
    GSM184763
    CAD_replicate49
    63
    men
    0.1373
    CAD
    GSM184764
    CAD_replicate50
    80
    men
    0.092
    CAD
    GSM184765
    CAD_replicate51
    73
    men
    0.129477
    CAD
    GSM184766
    CAD_replicate52
    48
    men
    0.115942028985507
    CAD
    GSM184767
    CAD_replicate53
    69
    women
    0.0818181818181818
    CAD
    GSM184768
    CAD_replicate101
    82
    women
    0.262376237623762
    CAD
    GSM184769
    CAD_replicate54
    42
    men
    0.163895486935867
    CAD
    GSM184770
    CAD_replicate102
    66
    men
    0.222748815165877
    CAD
    GSM184771
    CAD_replicate55
    63
    men
    0.175675675675676
    CAD
    GSM184772
    NoCAD_replicate26
    71
    men
    0.148014440433213
    NoCAD
    GSM184773
    CAD_replicate56
    72
    men
    0.142857142857143
    CAD
    GSM184774
    CAD_replicate57
    80
    men
    0.190751445086705
    CAD
    GSM184775
    CAD_replicate58
    49
    men
    0.12280701754386
    CAD
    GSM184776
    CAD_replicate59
    74
    men
    0.0945945945945946
    CAD
    GSM184777
    NoCAD_replicate27
    67
    men
    0.0836653386454183
    NoCAD
    GSM184778
    CAD_replicate60
    65
    men
    0.0218579234972678
    CAD
    GSM184779
    CAD_replicate103
    51
    men
    0.244582043343653
    CAD
    GSM184780
    NoCAD_replicate28
    70
    men
    0.113636363636364
    NoCAD
    GSM184781
    CAD_replicate61
    73
    men
    0.0487804878048781
    CAD
    GSM184782
    CAD_replicate62
    65
    men
    0.125
    CAD
    GSM184783
    CAD_replicate63
    60
    men
    0.136125654450262
    CAD
    GSM184784
    CAD_replicate64
    81
    men
    0.0375
    CAD
    GSM184785
    CAD_replicate65
    76
    men
    0.188612099644128
    CAD
    GSM184786
    CAD_replicate104
    60
    men
    0.262032085561497
    CAD
    GSM184787
    CAD_replicate105
    51
    men
    0.383177570093458
    CAD
    GSM184788
    NoCAD_replicate29
    47
    men
    0.0148367952522255
    NoCAD
    GSM184789
    CAD_replicate66
    65
    men
    0.208092485549133
    CAD
    GSM184790
    NoCAD_replicate30
    64
    women
    0.0655021834061135
    NoCAD
    GSM184791
    NoCAD_replicate31
    64
    women
    0.0904977375565611
    NoCAD
    GSM184792
    NoCAD_replicate48
    58
    women
    0.305555555555556
    NoCAD
    GSM184793
    NoCAD_replicate32
    68
    women
    0.028169014084507
    NoCAD
    GSM184794
    CAD_replicate67
    60
    men
    0.2
    CAD
    GSM184795
    CAD_replicate68
    67
    men
    0.130208333333333
    CAD
    GSM184796
    NoCAD_replicate33
    73
    women
    0.191135734072022
    NoCAD
    GSM184797
    CAD_replicate69
    69
    women
    0.0936555891238671
    CAD
    GSM184798
    CAD_replicate106
    55
    men
    0.261146496815287
    CAD
    GSM184799
    CAD_replicate107
    67
    men
    0.27536231884058
    CAD
    GSM184800
    CAD_replicate70
    84
    men
    0.142857142857143
    CAD
    GSM184801
    CAD_replicate71
    59
    men
    0.129032258064516
    CAD
    GSM184802
    CAD_replicate108
    73
    men
    0.264604810996564
    CAD
    GSM184803
    CAD_replicate109
    75
    men
    0.294642857142857
    CAD
    GSM184804
    CAD_replicate72
    53
    men
    0.0676156583629893
    CAD
    GSM184805
    NoCAD_replicate49
    54
    men
    0.255555555555556
    NoCAD
    GSM184806
    CAD_replicate73
    54
    men
    0.0981432360742706
    CAD
    GSM184807
    CAD_replicate74
    50
    women
    0.203703703703704
    CAD
    GSM184808
    CAD_replicate75
    64
    men
    0.206477732793522
    CAD
    GSM184809
    NoCAD_replicate34
    59
    men
    0.136531365313653
    NoCAD
    GSM184810
    CAD_replicate110
    62
    men
    0.189349112426035
    CAD
    GSM184811
    NoCAD_replicate35
    69
    women
    0.191780821917808
    NoCAD
    GSM184812
    NoCAD_replicate36
    74
    women
    0.166666666666667
    NoCAD
    GSM184813
    CAD_replicate76
    78
    women
    0.194888178913738
    CAD
    GSM184814
    NoCAD_replicate37
    31
    men
    0.106017191977077
    NoCAD
    GSM184815
    NoCAD_replicate38
    67
    men
    0.0727969348659004
    NoCAD
    GSM184816
    NoCAD_replicate39
    71
    men
    0.188235294117647
    NoCAD
    GSM184817
    CAD_replicate77
    47
    men
    0.108108108108108
    CAD
    GSM184818
    CAD_replicate78
    70
    men
    0.203947368421053
    CAD
    GSM184819
    CAD_replicate79
    61
    men
    0.163265306122449
    CAD
    GSM184820
    NoCAD_replicate40
    58
    men
    0.0863509749303621
    NoCAD
    GSM184821
    NoCAD_replicate41
    68
    men
    0.0272108843537415
    NoCAD
    GSM184822
    NoCAD_replicate50
    43
    men
    0.319261213720317
    NoCAD
    GSM184823
    NoCAD_replicate42
    58
    men
    0.0662824207492795
    NoCAD
    GSM184824
    NoCAD_replicate43
    54
    women
    0.191709844559585
    NoCAD
    GSM184825
    NoCAD_replicate44
    70
    men
    0.0909090909090909
    NoCAD

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