You are not logged in. | Log in
In Progress
Clinical

Genomic profiles for human peripheral blood T cells, B cells, natural killer cells, monocytes, and polymorphonuclear cells-GSE72642

Purpose

To demonstrate the potential use of such cell subtype-specific genomic expression data, a number of the major genes previously reported to be regulated in ischemic stroke, migraine, and Tourette syndrome are shown to be associated with distinct cell populations in blood.

Hypothesis

--

Experimental Design

This study includes data from major blood cell types from normal individuals. These cell types include CD4+ T cells, CD8+ T cells, CD19+ B cells, CD56+ natural killer cells, CD14+ monocytes and PMN (polymorphonuclear cells). The data were hybridized on 3 separate batches of gene chips.

Experimental Variables

--

Controls

--

Methods

--

Additional Information
  • Du X, Tang Y, Xu H, Lit L et al. Genomic profiles for human peripheral blood T cells, B cells, natural killer cells, monocytes, and polymorphonuclear cells: comparisons to ischemic stroke, migraine, and Tourette syndrome. Genomics2006 Jun;87(6):693-703. PMID: 16546348
  • Microarray
    Affymetrix HG-U133_Plus_2
    18 Samples Loaded: 18
    Human (Homo sapiens)
    T cells , B cells , Monocytes , Neutrophils , NK Cells
    Healthy
    Sample Set Spreadsheet
    Please log in in order to upload files.
    Samples Preview
    Sample ID !Sample_title cell type tissue diagnosis
    GSM1867065 peripheral blood CD19+ B cells, replicate 1 CD19+ B cells peripheral blood healthy
    GSM1867066 peripheral blood CD4+ T cells, replicate 1 CD4+ T cells peripheral blood healthy
    GSM1867067 peripheral blood CD8+ T cells, replicate 1 CD8+ T cells peripheral blood healthy
    GSM1867068 peripheral blood CD14+ monocytes, replicate 1 CD14+ monocytes peripheral blood healthy
    GSM1867069 peripheral blood CD56+ NK cells, replicate 1 CD56+ NK cells peripheral blood healthy
    Please log in in order to upload files.
    File
    Log2 Transformed
    Raw Signal
    •   |  View in GXB »
    Clinical Datasource
    Links

    Samples Viewer / Editor

    All fields are editable except the "Sample ID" column. To edit a cell, click within the cell. To edit a "date" cell, click on the calendar icon. To cancel an edit, press the ESC key.

    Sample ID !Sample Title Cell type Tissue Diagnosis
    GSM1867065
    peripheral blood CD19+ B cells, replicate 1
    CD19+ B cells
    peripheral blood
    healthy
    GSM1867066
    peripheral blood CD4+ T cells, replicate 1
    CD4+ T cells
    peripheral blood
    healthy
    GSM1867067
    peripheral blood CD8+ T cells, replicate 1
    CD8+ T cells
    peripheral blood
    healthy
    GSM1867068
    peripheral blood CD14+ monocytes, replicate 1
    CD14+ monocytes
    peripheral blood
    healthy
    GSM1867069
    peripheral blood CD56+ NK cells, replicate 1
    CD56+ NK cells
    peripheral blood
    healthy
    GSM1867070
    peripheral blood PMN, replicate 1
    polymorphonuclear cells
    peripheral blood
    healthy
    GSM1867071
    peripheral blood CD19+ B cells, replicate 2
    CD19+ B cells
    peripheral blood
    healthy
    GSM1867072
    peripheral blood CD4+ T cells, replicate 2
    CD4+ T cells
    peripheral blood
    healthy
    GSM1867073
    peripheral blood CD8+ T cells, replicate 2
    CD8+ T cells
    peripheral blood
    healthy
    GSM1867074
    peripheral blood CD14+ monocytes, replicate 2
    CD14+ monocytes
    peripheral blood
    healthy
    GSM1867075
    peripheral blood CD56+ NK cells, replicate 2
    CD56+ NK cells
    peripheral blood
    healthy
    GSM1867076
    peripheral blood PMN, replicate 2
    polymorphonuclear cells
    peripheral blood
    healthy
    GSM1867077
    peripheral blood CD19+ B cells, replicate 3
    CD19+ B cells
    peripheral blood
    healthy
    GSM1867078
    peripheral blood CD4+ T cells, replicate 3
    CD4+ T cells
    peripheral blood
    healthy
    GSM1867079
    peripheral blood CD8+ T cells, replicate 3
    CD8+ T cells
    peripheral blood
    healthy
    GSM1867080
    peripheral blood CD14+ monocytes, replicate 3
    CD14+ monocytes
    peripheral blood
    healthy
    GSM1867081
    peripheral blood CD56+ NK cells, replicate 3
    CD56+ NK cells
    peripheral blood
    healthy
    GSM1867082
    peripheral blood PMN, replicate 3
    polymorphonuclear cells
    peripheral blood
    healthy

    Group Sets View in Gene Expression Browser

    Name  
    All Samples   View
    Cell Types Default  View
    In order to make new Group Sets or change settings, please log in.

    Module Analysis

    Group Set  
    All Samples
    Cell Types
    Your bug report has been sent!