Sample Set Annotation Tool: Gene Expression-Based High Throughput Screening: APL Treatment with Candidate Compounds-GSE976

Study Design
Assay
Sample Info
Files
Info
Samples
Group Sets
Analysis

Purpose

Hypothesis

Experimental Design

Experimental Variables

Controls

Methods

Additional Information

Stegmaier K, Ross KN, Colavito SA, O'Malley S et al. Gene expression-based high-throughput screening(GE-HTS) and application to leukemia differentiation. Nat Genet 2004 Mar;36(3):257-63. PMID: 14770183

Expected Samples:

24 Samples Loaded: 24

Species

Human (Homo sapiens)

Sample Source

Neutrophils , Whole Blood , Monocytes

Disease

Acute Myeloid Leukemia (AML)

Treatment Protocol

Growth Protocol

Extraction Protocol

Storage Conditions

Sample Set Spreadsheet

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Samples Preview

Sample ID	!Sample_title	Grouping
GSM15272	APL1	APL control
GSM15394	APL2	APL control
GSM15395	APL_RA1	APL+ATRA
GSM15412	APL_RA2	APL+ATRA
GSM15413	APL_Keto1	APL+16keto

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File
sampleset4000033_sampleannotations.csv Sample Set Spreadsheet

Samples Viewer / Editor

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Sample ID	!Sample Title	Grouping
GSM15272	APL1	APL control
GSM15394	APL2	APL control
GSM15395	APL_RA1	APL+ATRA
GSM15412	APL_RA2	APL+ATRA
GSM15413	APL_Keto1	APL+16keto
GSM15414	APL_Keto2	APL+16keto
GSM15415	APL_Phen1	APL+Phen
GSM15416	APL_Phen2	APL+Phen
GSM15417	APL_EGFR1	APL+EGFR
GSM15418	APL_EGFR2	APL+EGFR
GSM15419	APL_Erythro1	APL+Erytho
GSM15420	APL_Erythro2	APL+Erytho
GSM15421	AML1	AML Control
GSM15422	AML2	AML Control
GSM15423	AML3	AML Control
GSM15424	AML4	AML Control
GSM15425	AML5	AML Control
GSM15426	AML6	AML Control
GSM15427	poly1	Neutrophils
GSM15428	poly2	Neutrophils
GSM15429	poly3	Neutrophils
GSM15430	mono1	Monocytes
GSM15431	mono2	Monocytes
GSM15432	mono3	Monocytes

Group Sets View in Gene Expression Browser

Name
All Samples	Default	View
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Module Analysis

Group Set
All Samples

SIDRA