Sample Set Annotation Tool: Transcriptome analysis of HIV-infected peripheral blood monocytes-GSE50011

Study Design
Assay
Sample Info
Files
Info
Samples
Group Sets
Analysis

Purpose

Hypothesis

Transcriptome changes in peripheral blood monocytes relate to neurocognitive functioning in HIV+ individuals, and that such alterations could be useful as biomarkers of worsening HIV-associated neurocognitive disorder (HAND).

Experimental Design

mRNA was isolated from the monocytes of 86 HIV+ adults and analyzed with the Illumina HT-12 v4 Expression BeadChip. Neurocognitive functioning, HAND diagnosis, and other clinical and virologic variables were determined.

Experimental Variables

Controls

Methods

Additional Information

Levine AJ, Horvath S, Miller EN, Singer EJ et al. Transcriptome analysis of HIV-infected peripheral blood monocytes: gene transcripts and networks associated with neurocognitive functioning. J Neuroimmunol 2013 Dec 15;265(1-2):96-105. PMID: 24094461

Expected Samples:

86 Samples Loaded: 86

Species

Human (Homo sapiens)

Sample Source

Monocytes

Disease

HIV

Treatment Protocol

Growth Protocol

Extraction Protocol

Storage Conditions

Sample Set Spreadsheet

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Samples Preview

Sample ID	Age	Date	Weight	!Sample_title	cell type
GSM1212268	61	10/8/2011	83.1	PBMC_1	Peripheral blood monocytes
GSM1212269	54	10/15/2011	81	PBMC_2	Peripheral blood monocytes
GSM1212270	43	10/17/2011		PBMC_3	Peripheral blood monocytes
GSM1212271	49	11/15/2011	73.2	PBMC_4	Peripheral blood monocytes
GSM1212272	62	11/16/2011	88.8	PBMC_5	Peripheral blood monocytes

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File
sampleset4000099_sampleannotations.csv Sample Set Spreadsheet

Samples Viewer / Editor

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Sample ID	Age	Date	Weight	!Sample Title	Cell type	Batch	Disease state	Ml1a7	Motor07 Nba	Ml1a1	Ml1a2	Ml1a5	Ml1a6	Race	Ml1a3	Ml1a4	Average07 Nba	Height	Mem07 Nba	Leu3n	Cnspengrp	Hash	Artdate	Cocaine	Lastedcat	Speed07 Nba	Anycancer	Halluc	Osteodt	Cvdt1	Smoke	Wmem07 Nba	Alcohol	Heroin	Echlor	Hivneuro	Cesd	Bmi	Exec07 Nba	Hivdate	Learn07 Nba	Haartdate	Ghb	Svisit	Vload	Nlang	Handd	Fromscyr	Developmental stage	Cnsinf	Pddate	Hand07 Nba	Cd4low	Club	CD4 grouping
GSM1212268	61	10/8/2011	83.1	PBMC_1	Peripheral blood monocytes	1	HIV+		69.6	262				1			56.36667	1.727	45.1	576	3	0	1/15/1994	0	6	59	0	0			2	47.5	0	0	0	0	0	27.9	58.8	11/10/1991	58.2		0	560	29	1	1	19.91	adult	0		0	282	0	Less than 400
GSM1212269	54	10/15/2011	81	PBMC_2	Peripheral blood monocytes	1	HIV+		54.4	262				1			58.66667	1.88	36.2	532	3	0	7/14/2006	0	5	76.2	0	0			2	58.3	0	0	0	0	20	22.9	73.2	8/1/2003	53.7		0	560	10	1	2	8.21	adult	0		0	320	0	Less than 400
GSM1212270	43	10/17/2011		PBMC_3	Peripheral blood monocytes	1	HIV+		44.9	191	253			8			34.23333	1.702	29.1	713	4	3	3/22/2003	0	3	31.5	0	0			1	56.1	0	0	0	0	48		25.6	11/13/2002	18.2		0	560	10	1	1	8.93	adult	0		3	235	0	Less than 400
GSM1212271	49	11/15/2011	73.2	PBMC_4	Peripheral blood monocytes	1	HIV+		35.3	191	253			2			36.91667	1.829	70.2	865	4	0	10/19/1998	0	4	9.1	0	0			2	28.9	1	0	0	1	8	21.9	17.7	4/10/2002	60.3		0	560	10	1	1	9.6	adult	0		2	486	0	More than 500
GSM1212272	62	11/16/2011	88.8	PBMC_5	Peripheral blood monocytes	1	HIV+		75.7	243	204			1	264	211	68.41667	1.93	70.5	215	3	0	2/20/1998	0	6	69.3	0	0			1	49.9	3	0	0	1	1	23.8	73.4	12/14/1989	71.7		0	560	10	1	1	21.92	adult	1		0	176	0	Less than 400
GSM1212273	53	11/16/2011		PBMC_6	Peripheral blood monocytes	1	HIV+		38.1	191	253			1			43.15	1.803	48.3	688	4	0	2/16/1992	0	5	42.7	0	0			1	34.7	2	0	0	1	6		56.5	5/3/1984	38.6		0	560	10	1	2	27.54	adult	0		1	262	0	Less than 400
GSM1212274	52	11/16/2011	82.8	PBMC_7	Peripheral blood monocytes	1	HIV+		67.9	264	253			1			45.4	1.626	48.5	476	3	0	10/1/1989	0	6	33.7	0	0			1	41.1	0	0	0	0	3	31.3	26.8	8/29/1984	54.4		0	560	10	1	1	27.21	adult	1		1	114	0	Less than 400
GSM1212275	52	11/23/2011	76.9	PBMC_8	Peripheral blood monocytes	1	HIV+		70.4	256	254	265		2	264	211	77.36667	1.778	73.6	631	3	0	12/22/1995	0	6	107.4	0	0			2	59.7	0	0	0	0	9	24.3	70.7	11/10/1994	82.4		0	560	10	1	1	17.03	adult	0		0	56	0	Less than 400
GSM1212276	38	11/29/2011		PBMC_9	Peripheral blood monocytes	1	HIV+		44.8	262				2			44.5	1.651	37.9	369	3	3	1/17/2002	0	5	35.3	0	0			2		1	0	0	0	2		60.9	4/15/2002	43.6		0	560	10	1	1	9.62	adult	0		1	227	0	Less than 400
GSM1212277	54	11/30/2011	106	PBMC_10	Peripheral blood monocytes	1	HIV+		73.3	262				1			48.75	1.727	29.5	673	3	0	9/4/2010	0	4	55	0	0			2	55.9	2	0	0	0	2	35.5	43.1	3/10/2010	35.7		0	560	10	1	1	1.72	adult	0		1	341	0	Less than 400
GSM1212278	63	12/17/2011	76.7	PBMC_11	Peripheral blood monocytes	1	HIV+			264	253			1			76.08	1.803	63.4	610	3		1/23/1996		4	106.3	1					47.9				0		23.6	90.6	1/30/1985	72.2			560	10	1	1	26.88	adult	0		0	108		Less than 400
GSM1212279	65	1/4/2012	51.9	PBMC_12	Peripheral blood monocytes	1	HIV+		9.1	218	204			1	191	264	25.01667	1.702	16.7	405	4	1	8/8/1988	0	6	31.8	0	0		11/15/2001	2	49.4	0	0	0	1	15	17.9	25.8	5/22/1984	17.3	2/13/2003	0	560	10	1	1	27.62	adult	1	8/11/2006	3	1	0	Less than 400
GSM1212280	67	1/7/2012	85.7	PBMC_13	Peripheral blood monocytes	1	HIV+		55	240				1			63.91667	1.778	78.9	851	4	0	7/5/1997	0	4	65.7	0	0			2	56.8	0	0	0	1	3	27.1	61.2	7/19/1994	65.9		0	560	10	1	1	17.47	adult	0		0	301	0	Less than 400
GSM1212281	58	1/7/2012	87.9	PBMC_14	Peripheral blood monocytes	1	HIV+			262				1			61.8	1.753	56.9	843	3	2	4/16/1992	0	5	55.8	0	0			1	67.7	2	0	0	0	6	28.6	68.9	6/14/1984	59.7		0	560	10	1	1	27.56	adult	0		0	401	0	More than 500
GSM1212282	60	1/11/2012	67.2	PBMC_15	Peripheral blood monocytes	1	HIV+		15.9	254	217			1			32.63333	1.778	13.7	751	3	0	10/25/1995	0	6	29.1	0	0	1/12/2005		2	42.3	3	0	0	0	3	21.3	75.4	4/17/1985	19.4	3/31/1997	0	560	10	1	1	26.74	adult	0		2	281	0	Less than 400
GSM1212283	51	1/19/2012	79	PBMC_16	Peripheral blood monocytes	1	HIV+		49.3	227	220			1			62.45	1.778	57	786	4	0	4/23/1997	0	6	71.1	0	0			2	67.6	0	0	0	0	6	25	66.7	9/7/1984	63		0	560	10	1	1	27.36	adult	0		0	188	0	Less than 400
GSM1212284	62	1/13/2012	88.3	PBMC_17	Peripheral blood monocytes	1	HIV+		58.3	243	211			1	253		64.21667	1.803	62.8	513	3	0	10/13/1989	0	5	62.7	0	0			1	76.8	2	0	0	1		27.2	65.4	7/28/1984	59.3	4/9/1997	0	563	10	1	1	27.46	adult	0	12/12/1995	0	267	0	Less than 400
GSM1212285	59	2/2/2012	87.2	PBMC_18	Peripheral blood monocytes	1	HIV+		44.9	204	191			1	234		37.06667	1.803	64.5	465	4	0	11/13/1988	0	5	3.7	0	0			2	20	0	0	0	0	19	26.8	32.1	8/7/1984	57.2		0	560	10	1	1	27.49	adult	0		2	200	0	Less than 400
GSM1212286	44	2/7/2012	90.4	PBMC_19	Peripheral blood monocytes	1	HIV+		54.5	243	256			8	211	253	29.11667	1.778	19.1	648	3	0	11/30/1999	0	3	21.7	0	0			1	33.6	0	0	0	0	39	28.6	23.4	1/7/2003	22.4		0	560	33	1	1	9.08	adult	0		3	425	0	More than 500
GSM1212287	42	11/30/2011		PBMC_20	Peripheral blood monocytes	1	HIV+		67.3	262				2			52.08333	1.524	69.8	717	3	0	1/1/1987	0	4	29.2	0	0			2	26.5	0	0	0	1	0		57.8	4/1/2002	61.9		0	560	10	2	1	9.66	adult	0		2	384	0	Less than 400
GSM1212288	40	12/1/2011		PBMC_21	Peripheral blood monocytes	1	HIV+		13.5	217	253			8			31.42	1.626	38.2	911	3	0	10/4/2003	0	4	44.4	0	0		1/19/2005	3		0	0	0	1	19		16.7	10/22/2002	44.3		0	560	10	1	1	9.11	adult	0		2	465	0	More than 500
GSM1212289	43	12/6/2011	74	PBMC_22	Peripheral blood monocytes	1	HIV+		50.6	217	253			2			48.46667	1.651	65.8	762	3	0	8/13/2005	0	4	11.7	0	0			1	45.8	0	0	0	0	13	27.1	38.2	4/18/2002	78.7		0	560	10	2	1	9.63	adult	0		3	401	0	More than 500
GSM1212290	59	12/9/2011	88.8	PBMC_23	Peripheral blood monocytes	1	HIV+		62.3	243	211			1	253		63.56667	1.727	61.7	718	3	0	10/4/2008	0	5	60	0	0			2	62.8	3	0	0	1	11	29.8	75.6	10/19/1984	59		0	560	10	1	2	27.14	adult	0		0	432	0	More than 500
GSM1212291	63	12/10/2011	83.6	PBMC_24	Peripheral blood monocytes	1	HIV+		41.1	256	204			1	211	234	66.81667	1.88	76.1	576	3	1	12/10/1989	0	6	59.2	0	0			2	67.1	1	0	0	0	4	23.7	79.6	1/22/1985	77.8	12/9/1995	0	560	10	1	1	26.88	adult	0	1/18/2005	0	116	0	Less than 400
GSM1212292	55	12/13/2011		PBMC_25	Peripheral blood monocytes	1	HIV+		59.5	254	255			2			46.2	1.803	40	398	3	3	1/1/1987	0	4	54.4	0	0		1/21/2008	3	31.8	2	0	0	0	10		49.3	3/20/2003	42.2		0	560	10	2	1	8.73	adult	0		2	114	0	Less than 400
GSM1212293	50	12/14/2011	93.2	PBMC_26	Peripheral blood monocytes	1	HIV+		75	249	211			1	234	92	75.78333	1.753	55.7	598	4	3	2/4/1993	0	6	95	0	0		3/15/2001	1	75	0	0	0	0	19	30.3	90.1	10/25/1984	63.9		0	560	36	1	1	27.13	adult	0		0	222	0	Less than 400
GSM1212294	49	12/14/2011		PBMC_27	Peripheral blood monocytes	1	HIV+		47.4	243	264			2	211	253	52.16667	1.829	55.3	693	3	1	4/12/2001	0	5	58.7	0	0		2/4/2010	2	35.5	0	0	0	0	29		60.3	3/19/2003	55.8		0	560	94	2	1	8.74	adult	1		0	336	0	Less than 400
GSM1212295	67	12/15/2011	89	PBMC_28	Peripheral blood monocytes	1	HIV+		41.2	256	211			1	253	265	50.46667	1.88	59.6	338	3	0	3/17/1990	0	6	34.1	0	0			2	45.3	2	0	0	0	9	25.2	64.6	9/7/1989	58		0	560	10	1	1	22.27	adult	0		0	92	0	Less than 400
GSM1212296	46	10/18/2011		PBMC_29	Peripheral blood monocytes	1	HIV+		28.5	243	211			8	253		33.35	1.753	43.6	493	3	0	1/1/1987	0	3	30.1	0	0			2	20.8	0	0	0	0	12		40.8	7/22/2002	36.3		0	560	2840	1	1	9.24	adult	0		2	209	0	Less than 400
GSM1212297	61	10/19/2011	67.9	PBMC_30	Peripheral blood monocytes	1	HIV+		37.9	218	256			1	191	211	45.68333	1.753	68.4	470	4	0	6/18/1987	0	6	22.8	0	0			2	34.5	1	0	0	0	6	22.1	41.8	9/25/1984	68.7	1/31/1996	0	560	10	1	1	27.06	adult	0	4/17/1990	2	10	0	Less than 400
GSM1212298	64	10/19/2011	92.5	PBMC_31	Peripheral blood monocytes	1	HIV+		40.1	243	211			1	253		50.35	1.778	70.7	762	3	3	12/22/1997	0	4	26.8	0	0			3	52.5	1	0	0	1	47	29.3	43.2	8/21/1984	68.8		0	560	10	1	1	27.16	adult	0		0	366	0	Less than 400
GSM1212299	55	10/22/2011	89.9	PBMC_32	Peripheral blood monocytes	1	HIV+		-21.1	204	191			1	234		28.56667	1.854	45.2	147	4	0	12/31/1996	0	5	9.8	0	0			3	51.9	2	0	0	0	18	26.1	38.8	8/21/1984	46.8		0	560	10	1	1	27.17	adult	0		3	98	0	Less than 400
GSM1212300	58	10/22/2011	86.7	PBMC_33	Peripheral blood monocytes	1	HIV+		49.2	218	255			1	234		44.51667	1.854	39.3	371	3	3	11/3/1993	0	6	34.4	1	0			2	27.2	3	0	0	0	6	25.2	62.5	11/2/1984	54.5		0	560	10	1	1	26.97	adult	0		1	72	0	Less than 400
GSM1212301	49	10/22/2011	83.9	PBMC_34	Peripheral blood monocytes	1	HIV+		49	191	253			1			52.71667	1.854	37.6	910	4	0	7/18/1994	0	5	75.5	0	0			3	39.1	0	0	0	0	5	24.4	72.2	6/29/1984	42.9		0	560	10	1	1	27.31	adult	1		1	431	0	More than 500
GSM1212302	62	10/26/2011	59.1	PBMC_35	Peripheral blood monocytes	1	HIV+		86.5	264	253			2			62.78333	1.651	53.7	513	3	0	6/13/1993	0	6	75.2	0	0			2	63.5	0	0	0	1	29	21.7	56.8	9/15/1984	41	6/18/1996	0	560	10	2	1	27.11	adult	0	8/7/2000	0	329	0	Less than 400
GSM1212303	64	11/4/2011	84.8	PBMC_36	Peripheral blood monocytes	1	HIV+		41.5	243	211			1	234		36.4	1.829	7.4	360	2	0	1/31/1995	0	5	56.1	0	0			2	70.4	0	0	0	1	0	25.4	36.9	5/25/1984	6.1		0	560	303	1	1	27.44	adult	0		2	119	0	Less than 400
GSM1212304	31	1/25/2012		PBMC_37	Peripheral blood monocytes	2	HIV+		54.2	220	253			8			67.1	1.727	58.8	850	3	2	1/19/2006	0	4	95.4	0	0			2	52	1	0	0	0	17		85.6	2/9/2005	56.6		0	560	26200	1	1	6.96	adult	0		0	668	0	More than 500
GSM1212305	60	1/26/2012	51.7	PBMC_38	Peripheral blood monocytes	2	HIV+		34.4	243	204			1	211	234	48.76667	1.753	68.3	524	2	0	11/9/1998	0	6	37.6	0	0	9/15/2002		2	41.2	1	0	0	0	13	16.8	47.5	8/16/1984	63.6	11/9/1998	0	560	10	1	1	27.44	adult	0		2	30	0	Less than 400
GSM1212306	37	1/27/2012		PBMC_39	Peripheral blood monocytes	2	HIV+		48.6	243	211			2	253		59.35	1.803	61	303	3	2	4/20/2011	0	4	77.8	0	0			2	51.1	2	0	0	1	0		65.5	4/22/2002	52.1		0	560	10	1	1	9.77	adult	0		0	264	0	Less than 400
GSM1212307	60	1/28/2012	84.6	PBMC_40	Peripheral blood monocytes	2	HIV+		35.5					3			32.48333	1.803	12.2	441		3		0	4	45.5	0	0			2	27.2	0	0	0	1	34	26	58.2	2/6/1985	16.3		0	560	11900	1	1	26.97	adult	0		2	257	0	Less than 400
GSM1212308	49	2/1/2012	78	PBMC_41	Peripheral blood monocytes	2	HIV+		46.4	218	243			1	211	234	44.01667	1.803	41.3	490	3	0	5/4/1994	0	3	48.9	0	0			1	44.6	0	0	0	1	19	24	42.8	8/23/1984	40.1		0	560	10	1	2	27.44	adult	0		0	86	0	Less than 400
GSM1212309	55	2/2/2012	88	PBMC_42	Peripheral blood monocytes	2	HIV+	265	64.7	256	255	211	253	2	217	264	70.15	1.702	70.7	299	3	0	3/20/1990	0	4	60.5	0	0			3	69.4	0	0	0	1	0	30.4	79	5/12/1984	76.6		0	560	10	1	1	27.73	adult	0		0	21	0	Less than 400
GSM1212310	49	2/6/2012		PBMC_43	Peripheral blood monocytes	2	HIV+		7.2	243	211			3	253		39.54	1.727	37.9	317	3	2	3/1/2004	0	2	60.5	0	0			3		0	0	0	1	3		62.4	6/10/2003	29.7	3/1/2004	0	560	70	1	2	8.66	adult	0	8/27/2008	2	17	0	Less than 400
GSM1212311	63	2/8/2012		PBMC_44	Peripheral blood monocytes	2	HIV+		44.7	191	253			1			38.65	1.829	31.1	384	4	2	11/23/1992	0	6	59	0	0			1	36.6	2	0	0	0	5		35.4	8/21/1984	25.1		0	560	10	1	1	27.47	adult	0		1	55		Less than 400
GSM1212312	59	2/11/2012	88.6	PBMC_45	Peripheral blood monocytes	2	HIV+		54.5	262				1			44.58333	1.702	26.4	1091	3	2	4/30/2002	2	4	50.8	0	0			2	50.6	1	0	0	0	9	30.6	53.4	5/23/2001	31.8		0	560	10	1	1	10.72	adult	0		1	233	0	Less than 400
GSM1212313	51	2/11/2012	92.5	PBMC_46	Peripheral blood monocytes	2	HIV+		45.4	255	264			1	253		46.35	1.727	35.5	717	3	0	12/16/1989	0	5	61.3	0	0			2	72.5	3	0	0	0	17	31	40.2	11/7/1984	23.2		0	560	10	1	1	27.26	adult	0		2	316	0	Less than 400
GSM1212314	34	3/6/2012	86.6	PBMC_47	Peripheral blood monocytes	2	HIV+		62.3	262				2			51.86667	1.727	59.2	487	3	0	2/25/2000	0	1	46.2	0	0			2	46.5	0	0	0	0	21	29	44.7	7/29/2002	52.3		0	560	10	2	3	9.6	adult	0		0	7	0	Less than 400
GSM1212315	42	3/7/2012		PBMC_48	Peripheral blood monocytes	2	HIV+		60	191	253			8			46.08333	1.651	46.7	828	4	0	12/14/2002	0	3	37.1	0	0			2	37.3	0	0	0	1	12		50.7	9/14/2002	44.7		0	560	10	2	3	9.48	adult	1		1	298	0	Less than 400
GSM1212316	40	3/7/2012		PBMC_49	Peripheral blood monocytes	2	HIV+		55.5	243	147			2	211	234	30.21667	1.702	38.1	671	2	0	1/1/1987	0	3	-1	0	0			2	44.4	0	0	0	1	25		11	2/14/2003	33.3		0	560	10	2	1	9.06	adult	0		3	439	0	More than 500
GSM1212317	38	3/8/2012		PBMC_50	Peripheral blood monocytes	2	HIV+		65.7	243	211			8	253		69.03333	1.753	79.2	564	3	3	2/15/2002	0	4	72.1	0	0			3	57.3	1	0	0	0	34		60.8	8/15/2002	79.1		0	560	156000	2	1	9.56	adult	0		0	272		Less than 400
GSM1212318	54	3/8/2012	102	PBMC_51	Peripheral blood monocytes	2	HIV+		47.2	256	255	253		1	264	211	27.01667	1.778	28.8	365	3	0	6/28/1996	0	4	27.1	0	0			3	31	1	0	0	1	27	32.3	19.7	1/16/1985	8.3		0	560	10	1	1	27.14	adult	0		3	107	0	Less than 400
GSM1212319	60	3/10/2012	124.5	PBMC_52	Peripheral blood monocytes	2	HIV+		42.5	264	253			3			39.41667	1.88	42	751	3	0	2/15/1999	0	4	44.7	0	0			2	30.5	0	0	0	0	13	35.2	32.5	4/26/2003	44.3		0	560	10	1	1	8.87	adult	0		1	556	0	More than 500
GSM1212320	51	3/10/2012	90.1	PBMC_53	Peripheral blood monocytes	2	HIV+		16.6	191	253			1			29.8	1.905	44.1	561	4	0	10/13/1996	0	4	39.3	0	0			3	19.9	0	0	0	1	22	24.8	14.1	1/30/1985	44.8	10/13/1996	0	560	10	1	1	27.11	adult	0	7/18/2009	2	414	0	More than 500
GSM1212321	50	3/17/2012	94.6	PBMC_54	Peripheral blood monocytes	2	HIV+		49.3	254	255			1	234		49.8	1.829	56.8	605	3	0	7/28/1990	0	6	35.8	0	0			2	30.7	3	0	0	1	29	28.3	63.6	11/28/1984	62.6		0	560	10	1	1	27.3	adult	0		1	357	0	Less than 400
GSM1212322	61	3/23/2012	99.7	PBMC_55	Peripheral blood monocytes	2	HIV+		31.3	243	239			1	264	211	51.45	1.803	69	450	3	0	1/4/1988	0	3	33.3	0	0			2	39.9	0	0	0	1	11	30.7	68.3	1/14/1985	66.9	8/9/1996	0	560	10	1	1	27.19	adult	0	6/21/2006	2	232	0	Less than 400
GSM1212323	49	3/29/2012	69.8	PBMC_56	Peripheral blood monocytes	2	HIV+		31.5	262				8			43.53333	1.702	65.3	739	3	0	12/3/2002	0	6	43.8	0	0			3	41.3	1	0	0	0	2	24.1	31.4	4/23/2003	47.9		0	560	10	2	1	8.93	adult	0		1	64	0	Less than 400
GSM1212324	48	2/16/2012	79.9	PBMC_57	Peripheral blood monocytes	2	HIV+		75.3	249	211			8	253		56.91667	1.676	80.8	517	3	0	12/1/1999	0	1	35.9	0	0			1	36.6	1	0	0	0	0	28.4	34	7/24/2002	78.9		0	560	10	2	1	9.57	adult	0		1	309	0	Less than 400
GSM1212325	49	2/22/2012	55	PBMC_58	Peripheral blood monocytes	2	HIV+		22.5	262				8			33.31667	1.6	31.8	534	3	0	1/1/1987	0	2	33.1	0	0			3	41.4	0	0	0	0	8	21.5	34	4/7/2003	37.1		0	560	10	1	1	8.88	adult	0		2	20	0	Less than 400
GSM1212326	51	2/22/2012	70.1	PBMC_59	Peripheral blood monocytes	2	HIV+		64	243	254			1			70.46667	1.727	54.7	509	3	2	12/3/1990	2	4	103.7	0	0			3	74.5	0	0	0	0	3	23.5	69.4	8/31/1984	56.5		0	560	10	1	1	27.48	adult	0		0	282	0	Less than 400
GSM1212327	31	2/24/2012		PBMC_60	Peripheral blood monocytes	2	HIV+		37.5	256	211			8	253		36.01667	1.651	44.5	73	3	0	4/29/2008	0	6	24.4	0	0			3	17.5	1	0	0	1	24		50.6	5/1/2003	41.6	4/29/2008	0	560	616	1	1	8.82	adult	0	5/1/2003	3	33	0	Less than 400
GSM1212328	60	2/25/2012	65	PBMC_61	Peripheral blood monocytes	2	HIV+		61.1	256	254			3	264	211	73.3	1.727	69.1	403	3	0	1/21/1995	0	5	80.4	1	0			1	86.3	0	0	0	0	4	21.8	82.1	7/11/1992	60.8	1/21/1998	0	560	10	1	1	19.62	adult	0	1/12/2010	0	188	0	Less than 400
GSM1212329	58	2/29/2012	60.4	PBMC_62	Peripheral blood monocytes	2	HIV+		73.9	217	191			1	264	234	53.41667	1.753	37.5	828	4	0	9/9/1992	0	6	56.8	1	0			2	53.8	0	0	0	1	16	19.7	66.8	4/13/1985	31.7	2/7/1996	0	560	10	1	1	26.88	adult	0	7/14/1996	1	13	0	Less than 400
GSM1212330	53	3/1/2012		PBMC_63	Peripheral blood monocytes	2	HIV+		29.2	262				8			35.6	1.753	60	713	3	0	5/11/2001	0	1	11.7	0	0			2		0	0	0	0	14		20.6	2/6/2003	56.5		0	560	10	2	1	9.07	adult	0		3	225	0	Less than 400
GSM1212331	52	3/3/2012	89.3	PBMC_64	Peripheral blood monocytes	2	HIV+		16.3	264	253			1			33.1	1.88	17.6	812	3	0	12/15/1988	0	6	32	0	0	3/3/2012	10/12/2010	2	77.1	0	0	0	1	7	25.3	50.4	11/21/1984	5.2	11/3/1997	0	560	10	1	2	27.28	adult	0	8/4/2003	2	181	0	Less than 400
GSM1212332	50	3/3/2012	76.7	PBMC_65	Peripheral blood monocytes	2	HIV+		43.1	243	211			1	253		26.08333	1.778	1.9	685	3	0	3/15/1990	0	5	28.3	0	0			2	39.8	1	0	0	0	26	24.3	37.2	1/30/1985	6.2		0	560	29	1	1	27.09	adult	0		2	407	0	More than 500
GSM1212333	62	3/3/2012	70.1	PBMC_66	Peripheral blood monocytes	2	HIV+		36.8	159	255			1	217		33.35	1.829	39.3	615	3	2	5/14/1988	0	6	11.9	0	0		11/29/2000	3	55.5	1	0	0	0	0	21	14.8	7/21/1984	41.8		0	560	10	1	1	27.62	adult	0		2	361	0	Less than 400
GSM1212334	51	3/3/2012	84.7	PBMC_67	Peripheral blood monocytes	2	HIV+		34.2	256	211			1	253		33.08333	1.854	14.1	783	3	3	12/21/1987	0	3	56.4	0	0			1	44.3	3	0	0	0	0	24.6	30.8	9/13/1984	18.7		0	560	10	1	1	27.47	adult	0		2	184	0	Less than 400
GSM1212335	37	11/28/2011	68.6	PBMC_68	Peripheral blood monocytes	2	HIV+		41	254	255			2	264		23.25	1.753	41	488	3	0	1/1/1987	0	1	12.1	0	0			1	19.7	1	0	0	0	42	22.3	13.5	7/16/2002	12.2		0	560	110	2	1	9.37	adult	0		2	456	0	More than 500
GSM1212336	49	11/30/2011	103.2	PBMC_69	Peripheral blood monocytes	2	HIV+		26.4	264	253			1			45.86667	1.803	50.3	1012	3	3	1/19/1997	0	4	28.5	0	0			1	67.8	3	0	0	0	36	31.7	58.5	1/22/1996	43.7		0	560	10	1	1	15.85	adult	0		2	522	0	More than 500
GSM1212337	53	12/1/2011	65.4	PBMC_70	Peripheral blood monocytes	2	HIV+		56.4	220	254			1			57.2	1.727	74.9	326	3	0	4/8/2004	0	5	31.7	1	0			1	59.4	0	0	0	0	31	21.9	44.8	6/20/1984	76		0	560	10	1	1	27.45	adult	0		0	93	0	Less than 400
GSM1212338	66	12/8/2011	85.3	PBMC_71	Peripheral blood monocytes	2	HIV+		25.5	217	253			1			51.95	1.753	57.1	609	3	0	9/13/1992	0	6	77.1	0	0	1/4/2010		2	70.4	0	0	0	1	0	27.8	20.6	5/18/1984	61	9/13/1992	0	560	32	1	2	27.56	adult	0		2	452	0	More than 500
GSM1212339	32	1/3/2012		PBMC_72	Peripheral blood monocytes	2	HIV+		74.1	262				8			52.96667	1.702	44.8	642	3	0	5/7/2006	0	4	44.5	0	0			3	35.5	3	0	0	0	29		68.3	4/9/2003	50.6		0	560	10	1	1	8.74	adult	0		0	194	0	Less than 400
GSM1212340	48	1/7/2012	84.2	PBMC_73	Peripheral blood monocytes	2	HIV+		66.9	264	253			1			77.56667	1.829	67.4	786	3	0	10/26/1995	0	2	96.1	0	0			2	59.9	0	0	0	0	21	25.2	97.5	3/28/1994	77.6		0	560	10	1	1	17.78	adult	0		0	275	0	Less than 400
GSM1212341	59	1/13/2012	63.3	PBMC_74	Peripheral blood monocytes	2	HIV+		56	243	211			1	253		38.3	1.778	18.7	955	3	3	10/31/1996	0	6	41	0	0	2/5/2004		2	42.5	3	0	0	1		20	55.6	2/25/1985	16	10/18/2007	0	560	10	1	1	26.88	adult	0		2	383	0	Less than 400
GSM1212342	55	1/14/2012	77.5	PBMC_75	Peripheral blood monocytes	2	HIV+		31.1	262	227			1	234		55.66667	1.778	71.2	435	4	1	9/16/1990	0	5	39.3	0	0			3	47.3	3	0	0	0	21	24.5	71.5	6/27/1984	73.6		0	560	22	1	2	27.55	adult	0		1	211	0	Less than 400
GSM1212343	51	1/21/2012	106.1	PBMC_76	Peripheral blood monocytes	2	HIV+		59	256	211			3	253		65.06667	1.88	68.1		3	3	4/30/2010	0	4	76.3	0	0			2	39.8	0	0	0	0	4	30	67.5	4/3/1990	79.7		0	560	10	1	1	21.8	adult	0		0	564	0	More than 500
GSM1212344	30	1/23/2012	111.9	PBMC_77	Peripheral blood monocytes	2	HIV+		24.3					3			50.31667	1.854	61.6	670		0		0	5	42.7	0	0			1	64	1	0	0	1	4	32.5	55	1/10/2008	54.3		0	560	583	1	1	4.04	adult	0		0	285	0	Less than 400
GSM1212345	42	1/24/2012	88.1	PBMC_78	Peripheral blood monocytes	2	HIV+		68.4	262				2			67.25	1.676	65.8	432	3	0	9/18/2001	0	3	74.5	0	0			1	56.3	0	0	0	0	10	31.3	78.6	7/25/2002	59.9		0	560	10	2	2	9.5	adult	0		0	170	0	Less than 400
GSM1212346	63	10/5/2011	57	PBMC_79	Peripheral blood monocytes	2	HIV+		46.6	262				1			45.06667	1.702	50.2	472	3	0	11/15/1995	0	5	37.2	0	0			3	34.7	0	0	0	0	1	19.7	42.6	1/26/1985	59.1		0	560	10	1	1	26.69	adult	0		1	78	0	Less than 400
GSM1212347	61	10/5/2011	74.7	PBMC_80	Peripheral blood monocytes	2	HIV+		60.5	220	254			1	234		50.45	1.803	43.1	613	3	0	1/21/1995	0	5	42.8	0	0			2	43.2	0	0	0	0	1	23	48.6	2/12/1985	64.5		0	560	10	3	1	26.64	adult	0		0	383	0	Less than 400
GSM1212348	32	10/6/2011		PBMC_81	Peripheral blood monocytes	2	HIV+		55.6	243	211			8	253		37.45	1.676	52.2	338	3		7/14/2011		2	25.6	0				1	29.1				0			22.5	3/27/2003	39.7			560	1160	2	2	8.53	adult	0		2	339		Less than 400
GSM1212349	33	10/19/2011	72.6	PBMC_82	Peripheral blood monocytes	2	HIV+		76.9	191	253			8			51.63333	1.702	29.7	639	4	0	10/13/2002	0	2	43	0	0			2	60.8	1	0	0	0	26	25.1	63.9	12/11/2002	35.5		0	560	10	2	2	8.85	adult	0		1	294	0	Less than 400
GSM1212350	49	11/5/2011	78.8	PBMC_83	Peripheral blood monocytes	2	HIV+		45.6	217	253			3			63.33333	1.778	49.1	497	3	0	8/24/1992	0	4	77.4	0	0			2	55.5	2	0	0	0	27	24.9	91.1	1/25/1985	61.3		0	560	10	1	1	26.78	adult	0		0	44	0	Less than 400
GSM1212351	54	11/10/2011	73.9	PBMC_84	Peripheral blood monocytes	2	HIV+		65.6	147	217			1	234		48.23333	1.829	51.9	635	3	0	8/3/1994	0	6	43.9	0	0			1	39.7	1	0	0	1	10	22.1	41.8	8/23/1993	46.5		0	560	10	1	1	18.21	adult	0		0	266	0	Less than 400
GSM1212352	42	11/21/2011	76.6	PBMC_85	Peripheral blood monocytes	2	HIV+		15.9					3			36.13333	1.803	32.2	528		0		0	3	35.1	0	0			2	63.5	0	0	0	0	12	23.6	55.5	12/4/2002	14.6		0	560	11700	1	1	8.96	adult	0		2	382	0	Less than 400
GSM1212353	60	11/23/2011	62.5	PBMC_86	Peripheral blood monocytes	2	HIV+		75					1			46.76667	1.727	50.5	568		0		0	6	36.1	0	0			2	36.6	3	0	0	1	1	21	29.7	5/23/1984	52.7		0	560	26400	1	1	27.5	adult	0		1	348	0	Less than 400

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