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Transcriptome profiles of human monocyte and dendritic cell subsets-GSE35457

In Progress
Clinical

Transcriptome profiles of mouse and human monocyte and dendritic cell subsets-GSE35457

Purpose

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Hypothesis

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Experimental Design

Gene expression analysis using total RNA from specific human and mouse monocyte and dendritic cell subsets purified by FACS.

Experimental Variables

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Controls

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Methods

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Additional Information
  • Haniffa M, Shin A, Bigley V, McGovern N et al. Human tissues contain CD141hi cross-presenting dendritic cells with functional homology to mouse CD103+ nonlymphoid dendritic cells. Immunity 2012 Jul 27;37(1):60-73. PMID: 22795876
    • Microarray
    Illumina HumanHT-12 v4
    49 Samples Loaded: 49
    Human (Homo sapiens)
    Dendritic Cells , Monocytes
    Healthy
    Sample Set Spreadsheet
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    Samples Preview
    Sample ID !Sample_title cell type tissue disease state cell subtype
    GSM868877 bd-cd14-mono-1 monocyte blood healthy CD14
    GSM868878 bd-cd16-mono-1 monocyte blood healthy CD16
    GSM868879 blood-pdc-1 plasmacytoid dendritic cell blood healthy pDC
    GSM868880 blood-pdc-2 plasmacytoid dendritic cell blood healthy pDC
    GSM868881 blood-pdc-3 plasmacytoid dendritic cell blood healthy pDC

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    Clinical Datasource
    Links
    http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE35457
    http://www.ncbi.nlm.nih.gov/pubmed/22795876

    Samples Viewer / Editor

    All fields are editable except the "Sample ID" column. To edit a cell, click within the cell. To edit a "date" cell, click on the calendar icon. To cancel an edit, press the ESC key.

    Sample ID !Sample Title Cell type Tissue Disease state Cell subtype
    GSM868877
    bd-cd14-mono-1
    monocyte
    blood
    healthy
    CD14
    GSM868878
    bd-cd16-mono-1
    monocyte
    blood
    healthy
    CD16
    GSM868879
    blood-pdc-1
    plasmacytoid dendritic cell
    blood
    healthy
    pDC
    GSM868880
    blood-pdc-2
    plasmacytoid dendritic cell
    blood
    healthy
    pDC
    GSM868881
    blood-pdc-3
    plasmacytoid dendritic cell
    blood
    healthy
    pDC
    GSM868882
    blood-pdc-4
    plasmacytoid dendritic cell
    blood
    healthy
    pDC
    GSM868883
    blood-cd14_cd16-mono-1
    monocyte
    blood
    healthy
    CD14_CD16
    GSM868884
    blood-cd14_cd16-mono-2
    monocyte
    blood
    healthy
    CD14_CD16
    GSM868885
    blood-cd14_cd16-mono-3
    monocyte
    blood
    healthy
    CD14_CD16
    GSM868886
    blood-cd14_cd16-mono-4
    monocyte
    blood
    healthy
    CD14_CD16
    GSM868887
    blood-cd14_cd16-mono-5
    monocyte
    blood
    healthy
    CD14_CD16
    GSM868888
    blood-cd14_cd16-mono-6
    monocyte
    blood
    healthy
    CD14_CD16
    GSM868889
    blood-cd14-mono-1
    monocyte
    blood
    healthy
    CD14
    GSM868890
    blood-cd14-mono-2
    monocyte
    blood
    healthy
    CD14
    GSM868891
    blood-cd14-mono-3
    monocyte
    blood
    healthy
    CD14
    GSM868892
    blood-cd14-mono-4
    monocyte
    blood
    healthy
    CD14
    GSM868893
    blood-cd14-mono-5
    monocyte
    blood
    healthy
    CD14
    GSM868894
    blood-cd141-dc-1
    dendritic cell
    blood
    healthy
    CD141
    GSM868895
    blood-cd141-dc-2
    dendritic cell
    blood
    healthy
    CD141
    GSM868896
    blood-cd141-dc-3
    dendritic cell
    blood
    healthy
    CD141
    GSM868897
    blood-cd141-dc-4
    dendritic cell
    blood
    healthy
    CD141
    GSM868898
    blood-cd141-dc-5
    dendritic cell
    blood
    healthy
    CD141
    GSM868899
    blood-cd16-mono-1
    monocyte
    blood
    healthy
    CD16
    GSM868900
    blood-cd16-mono-2
    monocyte
    blood
    healthy
    CD16
    GSM868901
    blood-cd16-mono-3
    monocyte
    blood
    healthy
    CD16
    GSM868902
    blood-cd16-mono-4
    monocyte
    blood
    healthy
    CD16
    GSM868903
    blood-cd16-mono-5
    monocyte
    blood
    healthy
    CD16
    GSM868904
    blood-cd1c-dc-1
    dendritic cell
    blood
    healthy
    CD1c
    GSM868905
    blood-cd1c-dc-2
    dendritic cell
    blood
    healthy
    CD1c
    GSM868906
    blood-cd1c-dc-3
    dendritic cell
    blood
    healthy
    CD1c
    GSM868907
    blood-cd1c-dc-4
    dendritic cell
    blood
    healthy
    CD1c
    GSM868908
    blood-cd1c-dc-5
    dendritic cell
    blood
    healthy
    CD1c
    GSM868909
    blood-dc1c-dc-6
    dendritic cell
    blood
    healthy
    CD1c
    GSM868910
    skin-cd1c_cd141-dc-1
    dendritic cell
    skin
    healthy
    CD1c_CD141
    GSM868911
    skin-cd1c_cd141-dc-2
    dendritic cell
    skin
    healthy
    CD1c_CD141
    GSM868912
    skin-cd1c_cd141-dc-3
    dendritic cell
    skin
    healthy
    CD1c_CD141
    GSM868913
    skin-cd1c_cd141-dc-4
    dendritic cell
    skin
    healthy
    CD1c_CD141
    GSM868914
    skin-cd1c-dc-1
    dendritic cell
    skin
    healthy
    CD1c
    GSM868915
    skin-cd1c-dc-2
    dendritic cell
    skin
    healthy
    CD1c
    GSM868916
    skin-cd1c-dc-3
    dendritic cell
    skin
    healthy
    CD1c
    GSM868917
    skin-cd1c-dc-4
    dendritic cell
    skin
    healthy
    CD1c
    GSM868918
    skin-cd14-dc-1
    dendritic cell
    skin
    healthy
    CD14
    GSM868919
    skin-cd14-dc-2
    dendritic cell
    skin
    healthy
    CD14
    GSM868920
    skin-cd14-dc-3
    dendritic cell
    skin
    healthy
    CD14
    GSM868921
    skin-cd14-dc-4
    dendritic cell
    skin
    healthy
    CD14
    GSM868922
    skin-cd141-dc-1
    dendritic cell
    skin
    healthy
    CD141
    GSM868923
    skin-cd141-dc-2
    dendritic cell
    skin
    healthy
    CD141
    GSM868924
    skin-cd141-dc-3
    dendritic cell
    skin
    healthy
    CD141
    GSM868925
    skin-cd141-dc-4
    dendritic cell
    skin
    healthy
    CD141

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