Sample Set Annotation Tool: Whole Blood-GSE19491

Study Design
Assay
Sample Info
Files
Info
Samples
Group Sets
Analysis

Purpose

This series regroups different datasets (training set, test set, validation set, longitudinal set, separated cell set) to identify and characterise a specific transcriptional signature for patients with active TB, distinct from patients with latent TB and healthy controls.

Hypothesis

Experimental Design

Active Pulmonary TB: PTB - All patients were confirmed by isolation of Mycobacterium Tuberculosis on culture of sputum or bronchoalvelolar lavage fluid. Latent TB: LTB - All patients were screened at a tuberculosis clinic, being either new entrants to the UK from endemic countries or being household contacts of infectious cases, or in the case of the validation set recruited in South Africa, were residents of a high incidence country. All UK patients were positive by tuberculin skin test (>14mm if BCG vaccinated, >5mm if not vaccinated) and were also positive by Interferon-Gamma Release assay(IGRA); specifically Quantiferon Gold In-Tube Assay (Cellestis, Australia). The South African latent TB patients were all positive by Interferon-Gamma Release assay (IGRA); specifically Quantiferon Gold In-Tube Assay. Latent patients had no clinical, radiological or microbiological evidence of active infection and were asymptomatic. Healthy controls - these were volunteers without exposure to TB who were negative by both tuberculin skin test (<15mm if BCG vaccinated, <6mm if unvaccinated); and IGRA (as described above). Experimental variables : Patient group: Active PTB; Latent TB, Healthy controls (BCG vaccinated and unvaccinated). Ethnicity - a wide range of ethnic groups is represented. The active PTB group incorporates a range of smear positive and smear negative disease and a spectrum of disease extent/severity. Experimental methods: Whole blood was collected into Tempus tubes (Applied Biosystems, Foster City, CA, USA) and stored between -20degrees Celsius and -80 degrees Celsius before RNA extraction. For the training set cohort, and the active TB patients baseline samples in the longitudinal cohort, total RNA was isolated from whole blood using the PerfectPure RNA Blood kit (5 PRIME Inc, Gaithersburg, MD, USA). For the separated cell samples, total RNA was isolated using the Qiagen RNeasy Mini Kit. For all other cohorts Total RNA was isolated from whole blood using the MagMAX 96 well RNA isolation kit (Applied Biosystems, Foster City, CA, USA). Isolated total RNA was then globin reduced using the GLOBINclear 96-well format kit (Ambion, Austin, TX, USA) according to the manufacturer's instructions. Total and globin-reduced RNA integrity was assessed using an Agilent 2100 Bioanalyzer (Agilent, Palo Alto, CA). Biotinylated, amplified RNA targets (cRNA) were then prepared from the globin-reduced RNA using the Illumina CustomPrep RNA amplification kit (Ambion, Austin, TX, USA). Labeled cRNA was hybridized overnight to Sentrix HT12 V3 BeadChip arrays (>48,000 probes, Illumina Inc, San Diego, CA, USA), washed, blocked, stained and scanned on an Illumina BeadStation 500 following the manufacturer's protocols. Illumina's BeadStudio version 2 software was used to generate signal intensity values from the scans, substract background, and scale each microarray to the median average intensity for all samples (per-chip normalisation). This normalised data was used for all subsequent data analysis.

Experimental Variables

Controls

Methods

Additional Information

Berry MP, Graham CM, McNab FW, Xu Z et al. An interferon-inducible neutrophil-driven blood transcriptional signature in human tuberculosis. Nature2010 Aug 19;466(7309):973-7. PMID: 20725040

Expected Samples:

498 Samples Loaded: 498

Species

Human (Homo sapiens)

Sample Source

Monocytes , CD8 T cells , White Blood Cells , CD4 T cells

Disease

Tuberculosis

Treatment Protocol

Growth Protocol

Extraction Protocol

Storage Conditions

Sample Set Spreadsheet

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Samples Preview

Sample ID	Age	Ethnicity
GSM484368	28years, when baseline sample taken	White
GSM484369	21years, when baseline sample taken	White
GSM484370	49years, when baseline sample taken	South Asian
GSM484371	41years, when baseline sample taken	South Asian
GSM484372	33years, when baseline sample taken	Black

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Sample ID	Age	Bal Culture	Bal Smear	Ethnicity	Exposure Latent	Gender	Illness	Index Case Disease Site	Isolate Sensitivity	Sputum Culture	Sputum Smear	Tst	!Sample Title	Region of birth	Geographical region	Modal x-ray grade	Bcg vaccinated	Smear of index case	Healthy control	Isolate sensitivity	Time post initiation of treatment	Sputum smear status
GSM484368	28years, when baseline sample taken			White		Male	Control						CON_LON_test035_long_0_022				Yes			n.a	0_months	n.a
GSM484369	21years, when baseline sample taken			White		Male	Control						CON_LON_test036_long_0_023				Yes			n.a	0_months	n.a
GSM484370	49years, when baseline sample taken			South Asian		Female	Control						CON_LON_test037_long_0_024				Yes			n.a	0_months	n.a
GSM484371	41years, when baseline sample taken			South Asian		Female	Control						CON_LON_test038_long_0_025				Yes			n.a	0_months	n.a
GSM484372	33years, when baseline sample taken			Black		Female	Control						CON_LON_test039_long_0_026				Yes			n.a	0_months	n.a
GSM484373	28years, when baseline sample taken			Black		Female	Control						CON_LON_test040_long_0_027				Yes			n.a	0_months	n.a
GSM484374	23years, when baseline sample taken			White		Female	Control						CON_LON_test041_long_0_028				Yes			n.a	0_months	n.a
GSM484375	29years, when baseline sample taken			Other		Male	Control						CON_LON_test044_long_0_029				Yes			n.a	0_months	n.a
GSM484376	22years, when baseline sample taken			Asian other		Female	Control						CON_LON_test046_long_0_031				Yes			n.a	0_months	n.a
GSM484377	43years, when baseline sample taken			Black		Male	Control						CON_LON_test045_long_0_030				Yes			n.a	0_months	n.a
GSM484378	23years, when baseline sample taken			South Asian		Female	Control						CON_LON_test047_long_0_032				Yes			n.a	0_months	n.a
GSM484379	32years, when baseline sample taken			Asian other		Male	Control						CON_LON_test048_long_0_033				Yes			n.a	0_months	n.a
GSM484380	33years, when baseline sample taken			Asian Other		Female	PTB						PTB_LON_tr002_long_0_001				Yes			Fully_Sensitive	0_months	Positive
GSM484381	33years, when baseline sample taken			Asian Other		Female	PTB						PTB_LON_tr002_long_2_002				Yes			n.a	2_months	Negative
GSM484382	33years, when baseline sample taken			Asian Other		Female	PTB						PTB_LON_tr002_long_12_003				Yes			n.a	12_months	No_cough
GSM484383	31years, when baseline sample taken			South Asian		Male	PTB						PTB_LON_tr007_long_0_004				Yes			Fully_Sensitive	0_months	Positive
GSM484384	31years, when baseline sample taken			South Asian		Male	PTB						PTB_LON_tr007_long_2_005				Yes			n.a	2_months	No_cough
GSM484385	31years, when baseline sample taken			South Asian		Male	PTB						PTB_LON_tr007_long_12_006				Yes			n.a	12_months	No_cough
GSM484386	29years, when baseline sample taken			White		Male	PTB						PTB_LON_tr012_long_0_007				Yes			Fully_Sensitive	0_months	Positive
GSM484387	51years, when baseline sample taken			White		Male	PTB						PTB_LON_tr015_long_0_010				Yes			Fully_Sensitive	0_months	Positive
GSM484388	48years, when baseline sample taken			Black		Female	PTB						PTB_LON_tr020_long_0_013				Yes			Fully_Sensitive	0_months	Negative
GSM484389	29years, when baseline sample taken			White		Male	PTB						PTB_LON_tr012_long_2_008				Yes			n.a	2_months	No_cough
GSM484390	51years, when baseline sample taken			White		Male	PTB						PTB_LON_tr015_long_2_011				Yes			Fully_Sensitive	2_months	Positive
GSM484391	48years, when baseline sample taken			Black		Female	PTB						PTB_LON_tr020_long_2_014				Yes			n.a	2_months	No_cough
GSM484392	29years, when baseline sample taken			White		Male	PTB						PTB_LON_tr012_long_12_009				Yes			n.a	12_months	No_cough
GSM484393	51years, when baseline sample taken			White		Male	PTB						PTB_LON_tr015_long_12_012				Yes			n.a	12_months	Negative
GSM484394	48years, when baseline sample taken			Black		Female	PTB						PTB_LON_tr020_long_12_015				Yes			n.a	12_months	No_cough
GSM484395	21years, when baseline sample taken			Black		Female	PTB						PTB_LON_tr026_long_0_016				No			Fully_Sensitive	0_months	Positive
GSM484396	21years, when baseline sample taken			Black		Female	PTB						PTB_LON_tr026_long_2_017				No			Fully_Sensitive	2_months	Positive
GSM484397	21years, when baseline sample taken			Black		Female	PTB						PTB_LON_tr026_long_12_018				No			n.a	12_months	No_cough
GSM484398	29years, when baseline sample taken			South Asian		Male	PTB						PTB_LON_tr037_long_0_019				No			Resistant Isoniazid	0_months	Positive
GSM484399	29years, when baseline sample taken			South Asian		Male	PTB						PTB_LON_tr037_long_2_020				No			n.a	2_months	Negative
GSM484400	29years, when baseline sample taken			South Asian		Male	PTB						PTB_LON_tr037_long_12_021				No			n.a	12_months	No_cough
GSM484448	34	n.a	n.a	Black	Contact_Screen	Male	Latent	pulm	n.a	n.a	n.a	27	LTB_LON_tr001	non_UK_Born	London	Minimal	Yes	Sm+
GSM484449	31	tuberculosis	scanty	South Asian	n.a	Male	PTB	n.a	Fully_sensitive	n.a	n.a	11	PTB_LON_tr007	UK_Born	London	Moderate	Yes	n.a
GSM484450	28	n.a	n.a	White	n.a	Female	Control (BCG+)	n.a	n.a	n.a	n.a	5	CON_LON_tr032	UK_Born	London	n.a	Yes	n.a
GSM484451	48	no_growth_6_weeks	nil	Black	n.a	Female	PTB	n.a	Fully_sensitive	tuberculosis	nil	25	PTB_LON_tr020	non_UK_Born	London	Minimal	Yes	n.a
GSM484452	30	n.a	n.a	Black	New_Entrant	Male	Latent	n.a	n.a	n.a	n.a	20	LTB_LON_tr010	non_UK_Born	London	No disease	Yes	n.a
GSM484453	34	n.a	n.a	White	n.a	Female	Control (BCG-)	n.a	n.a	n.a	n.a	0	CON_LON_tr023	non_UK_Born	London	n.a	No	n.a
GSM484454	27	n.a	n.a	White	n.a	Male	Control (BCG+)	n.a	n.a	n.a	n.a	13	CON_LON_tr030	non_UK_Born	London	n.a	Yes	n.a
GSM484455	40	n.a	n.a	Asian Other	GP_Referral	Female	Latent	pulm	n.a	n.a	n.a	23	LTB_LON_tr013	non_UK_Born	London	No disease	Yes	unknown
GSM484456	51	n.a	n.a	White	n.a	Male	PTB	n.a	Fully_sensitive	tuberculosis	+++	15	PTB_LON_tr015	non_UK_Born	London	Advanced	Yes	n.a
GSM484457	31	n.a	n.a	White	n.a	Female	Control (BCG-)	n.a	n.a	n.a	n.a	0	CON_LON_tr025	non_UK_Born	London	n.a	No	n.a
GSM484458	43	n.a	n.a	Black	Contact_Screen	Male	Latent	extrapulm	n.a	n.a	n.a	37	LTB_LON_tr008	non_UK_Born	London	Minimal	Yes	n.a
GSM484459	33	tuberculosis	+	Asian Other	n.a	Female	PTB	n.a	Fully_sensitive	tuberculosis	nil	22	PTB_LON_tr002	non_UK_Born	London	Moderate	Yes	n.a
GSM484460	32	n.a	n.a	White	Contact_Screen	Male	Latent	pulm	n.a	n.a	n.a	17	LTB_LON_tr003	non_UK_Born	London	No disease	Yes	Sm+
GSM484461	23	n.a	n.a	Black	Contact_Screen	Female	Latent	unknown	n.a	n.a	n.a	17	LTB_LON_tr029	non_UK_Born	London	No disease	No	n.a
GSM484462	28	n.a	n.a	White	n.a	Male	Control (BCG+)	n.a	n.a	n.a	n.a	7	CON_LON_tr040	UK_Born	London	n.a	Yes	n.a
GSM484463	22	n.a	n.a	Black	n.a	Male	PTB	n.a	Resistant Streptomycin	tuberculosis	scanty	n.a	PTB_LON_tr031	non_UK_Born	London	Moderate	Yes	n.a
GSM484464	21	n.a	n.a	Asian Other	Contact_Screen	Female	Latent	pulm	n.a	n.a	n.a	15	LTB_LON_tr011	non_UK_Born	London	No disease	Yes	Sm+
GSM484465	31	n.a	n.a	White	n.a	Female	Control (BCG-)	n.a	n.a	n.a	n.a	0	CON_LON_tr039	non_UK_Born	London	n.a	No	n.a
GSM484466	29	tuberculosis	scanty	White	n.a	Male	PTB	n.a	Fully_sensitive	tuberculosis	nil	20	PTB_LON_tr012	UK_Born	London	Moderate	Yes	n.a
GSM484467	30	no_growth_6_weeks	nil	Black	Contact_Screen	Male	Latent	pulm	n.a	n.a	n.a	27	LTB_LON_tr006	non_UK_Born	London	No disease	Yes	unknown
GSM484468	23	tuberculosis	nil	Asian Other	n.a	Female	PTB	n.a	Fully_sensitive	no_growth_6_weeks	nil	10	PTB_LON_tr019	non_UK_Born	London	Advanced	Yes	n.a
GSM484469	19	n.a	n.a	South Asian	Contact_Screen	Male	Latent	extrapulm	n.a	n.a	n.a	20	LTB_LON_tr027	non_UK_Born	London	No disease	Yes	n.a
GSM484470	27	tuberculosis	nil	South Asian	New_Entrant	Male	PTB	n.a	Fully_sensitive	n.a	n.a	n.a	PTB_LON_tr018	non_UK_Born	London	Minimal	Yes	n.a
GSM484471	25	n.a	n.a	Asian Other	Contact_Screen	Female	Latent	pulm	n.a	n.a	n.a	19	LTB_LON_tr035	non_UK_Born	London	No disease	Yes	Sm+
GSM484472	21	n.a	n.a	Black	New_Entrant	Female	PTB	n.a	Fully_sensitive	tuberculosis	++	n.a	PTB_LON_tr026	non_UK_Born	London	Advanced	No	n.a
GSM484473	24	n.a	n.a	White	Contact_Screen	Female	Latent	pulm	n.a	n.a	n.a	12	LTB_LON_tr014	non_UK_Born	London	Minimal	No	Sm+
GSM484474	29	n.a	n.a	South Asian	n.a	Male	PTB	n.a	Resistant Isoniazid	tuberculosis	+	n.a	PTB_LON_tr038	non_UK_Born	London	Moderate	No	n.a
GSM484475	72	tuberculosis	nil	Other	n.a	Male	PTB	n.a	Fully_sensitive	n.a	n.a	22	PTB_LON_tr037	non_UK_Born	London	Moderate	Not_Known	n.a
GSM484476	37	n.a	n.a	South Asian	Contact_Screen	Female	Latent	pulm	n.a	n.a	n.a	28	LTB_LON_tr009	UK_Born	London	Minimal	No	unknown
GSM484477	35	n.a	n.a	White	n.a	Female	Control (BCG+)	n.a	n.a	n.a	n.a	0	CON_LON_tr042	UK_Born	London	n.a	Yes	n.a
GSM484478	25	tuberculosis	nil	White	n.a	Female	PTB	n.a	Fully_sensitive	tuberculosis	scanty	4	PTB_LON_tr022	UK_Born	London	Moderate	Yes	n.a
GSM484479	31	n.a	n.a	White	n.a	Female	Control (BCG-)	n.a	n.a	n.a	n.a	0	CON_LON_tr028	non_UK_Born	London	n.a	No	n.a
GSM484480	35	n.a	n.a	White	n.a	Male	Control (BCG-)	n.a	n.a	n.a	n.a	0	CON_LON_tr016	non_UK_Born	London	n.a	No	n.a
GSM484481	20	n.a	n.a	White	n.a	Male	Control (BCG+)	n.a	n.a	n.a	n.a	0	CON_LON_tr033	UK_Born	London	n.a	Yes	n.a
GSM484482	39	n.a	n.a	Black	Contact_Screen	Female	Latent	pulm	n.a	n.a	n.a	28	LTB_LON-tr004	non_UK_Born	London	No disease	Yes	Sm-
GSM484483	20	n.a	n.a	White	n.a	Female	Control (BCG+)	n.a	n.a	n.a	n.a	0	CON_LON_tr041	UK_Born	London	n.a	Yes	n.a
GSM484484	52	n.a	n.a	South Asian	New_Entrant	Female	Latent	n.a	n.a	n.a	n.a	30	LTB_LON_tr036	non_UK_Born	London	No disease	Yes	n.a
GSM484485	23	tuberculosis	scanty	Black	n.a	Female	PTB	n.a	Fully_sensitive	tuberculosis	nil	20	PTB_LON_tr021	non_UK_Born	London	Minimal	No	n.a
GSM484486	52	n.a	n.a	Asian Other	Contact_Screen	Male	Latent	pulm	n.a	n.a	n.a	19	LTB_LON_tr024	non_UK_Born	London	No disease	Yes	Sm+
GSM484487	35	n.a	n.a	White	n.a	Female	Control (BCG-)	n.a	n.a	n.a	n.a	0	CON_LON_tr017	non_UK_Born	London	n.a	No	n.a
GSM484488	32	n.a	n.a	Black	Contact_Screen	Male	Latent	pulm	n.a	n.a	n.a	18	LTB_LON_tr005	non_UK_Born	London	No disease	Yes	Sm+
GSM484489	30	n.a	n.a	Asian Other	Contact_Screen	Female	Latent	extrapulm	n.a	n.a	n.a	19	LTB_LON_tr034	non_UK_Born	London	No disease	Not_Known	n.a
GSM484500	22			Black		Male	PTB			M.tuberculosis	3+	n.a	PTB_SA_val001	non_UK_born	South Africa		No
GSM484501	21			Black		Female	PTB			M.tuberculosis	1+	n.a	PTB_SA_val002	non_UK_born	South Africa		Yes
GSM484502	27			Black		Male	PTB			M.tuberculosis	3+	n.a	PTB_SA_val003	non_UK_born	South Africa		No
GSM484503	25			Black		Male	PTB			M.tuberculosis	Negative	n.a	PTB_SA_val004	non_UK_born	South Africa		Yes
GSM484504	33			Black		Female	LATENT TB			n.a	n.a	15	LTB_SA_val021	non_UK_born	South Africa		No
GSM484505	19			Black		Female	LATENT TB			n.a	n.a	14	LTB_SA_val022	non_UK_born	South Africa		No
GSM484506	21			Black		Male	LATENT TB			n.a	n.a	15	LTB_SA_val023	non_UK_born	South Africa		No
GSM484507	20			Black		Female	LATENT TB			n.a	n.a	22	LTB_SA_val024	non_UK_born	South Africa		Not Known
GSM484508	24			Black		Female	LATENT TB			n.a	n.a	5	LTB_SA_val025	non_UK_born	South Africa		Not Known
GSM484509	22			Black		Female	LATENT TB			n.a	n.a	20	LTB_SA_val026	non_UK_born	South Africa		Not Known
GSM484510	24			Black		Male	LATENT TB			n.a	n.a	7	LTB_SA_val027	non_UK_born	South Africa		No
GSM484511	18			Black		Female	LATENT TB			n.a	n.a	0	LTB_SA_val028	non_UK_born	South Africa		No
GSM484512	18			Black		Female	LATENT TB			n.a	n.a	15	LTB_SA_val029	non_UK_born	South Africa		No
GSM484513	24			Black		Female	LATENT TB			n.a	n.a	0	LTB_SA_val030	non_UK_born	South Africa		Not Known
GSM484514	22			Black		Male	LATENT TB			n.a	n.a	0	LTB_SA_val031	non_UK_born	South Africa		Not Known
GSM484515	25			Black		Male	PTB			M.tuberculosis	3+	n.a	PTB_SA_val005	non_UK_born	South Africa		Yes
GSM484516	47			Black		Male	PTB			M.tuberculosis	2+	n.a	PTB_SA_val006	non_UK_born	South Africa		No
GSM484517	32			Black		Female	PTB			M.tuberculosis	1+	n.a	PTB_SA_val007	non_UK_born	South Africa		Yes
GSM484518	40			Black		Male	PTB			M.tuberculosis	1+	n.a	PTB_SA_val008	non_UK_born	South Africa		No
GSM484519	46			Black		Female	PTB			M.tuberculosis	3+	n.a	PTB_SA_val009	non_UK_born	South Africa		Yes
GSM484520	18			Black		Male	LATENT TB			n.a	n.a	0	LTB_SA_val032	non_UK_born	South Africa		No
GSM484521	18			Black		Male	LATENT TB			n.a	n.a	4	LTB_SA_val033	non_UK_born	South Africa		No
GSM484522	18			Black		Female	LATENT TB			n.a	n.a	0	LTB_SA_val034	non_UK_born	South Africa		No
GSM484523	20			Black		Female	LATENT TB			n.a	n.a	11	LTB_SA_val035	non_UK_born	South Africa		No
GSM484524	42			Black		Male	PTB			M.tuberculosis	1+	n.a	PTB_SA_val010	non_UK_born	South Africa		No
GSM484525	48			Black		Female	PTB			M.tuberculosis	2+	n.a	PTB_SA_val011	non_UK_born	South Africa		No
GSM484526	27			Black		Male	PTB			M.tuberculosis	2+	n.a	PTB_SA_val012	non_UK_born	South Africa		No
GSM484527	45			Black		Male	PTB			M.tuberculosis	Scanty Positive	n.a	PTB_SA_val013	non_UK_born	South Africa		No
GSM484528	21			Black		Male	LATENT TB			n.a	n.a	14	LTB_SA_val037	non_UK_born	South Africa		No
GSM484529	24			Black		Female	LATENT TB			n.a	n.a	20	LTB_SA_val038	non_UK_born	South Africa		No
GSM484530	21			Black		Male	LATENT TB			n.a	n.a	10	LTB_SA_val039	non_UK_born	South Africa		No
GSM484531	27			Black		Female	LATENT TB			n.a	n.a	14	LTB_SA_val040	non_UK_born	South Africa		No
GSM484532	24			Black		Male	LATENT TB			n.a	n.a	0	LTB_SA_val041	non_UK_born	South Africa		No
GSM484533	23			Black		Male	PTB			M.tuberculosis	1+	n.a	PTB_SA_val014	non_UK_born	South Africa		No
GSM484534	24			Black		Female	PTB			M.tuberculosis	3+	n.a	PTB_SA_val015	non_UK_born	South Africa		Yes
GSM484535	38			Black		Male	PTB			M.tuberculosis	3+	n.a	PTB_SA_val016	non_UK_born	South Africa		No
GSM484536	27			Black		Male	PTB			M.tuberculosis	2+	n.a	PTB_SA_val017	non_UK_born	South Africa		No
GSM484537	18			Black		Female	LATENT TB			n.a	n.a	12	LTB_SA_val043	non_UK_born	South Africa		No
GSM484538	20			Black		Female	LATENT TB			n.a	n.a	24	LTB_SA_val044	non_UK_born	South Africa		No
GSM484539	24			Black		Female	LATENT TB			n.a	n.a	15	LTB_SA_val045	non_UK_born	South Africa		Yes
GSM484540	22			Black		Male	LATENT TB			n.a	n.a	10	LTB_SA_val046	non_UK_born	South Africa		Yes
GSM484541	26			Black		Male	LATENT TB			n.a	n.a	15	LTB_SA_val047	non_UK_born	South Africa		Yes
GSM484542	24			Black		Male	LATENT TB			n.a	n.a	10	LTB_SA_val048	non_UK_born	South Africa		Yes
GSM484543	31			Black		Male	PTB			M.tuberculosis	1+	n.a	PTB_SA_val018	non_UK_born	South Africa		No
GSM484544	41			Black		Male	PTB			M.tuberculosis	3+	n.a	PTB_SA_val019	non_UK_born	South Africa		No
GSM484545	42			Black		Male	PTB			M.tuberculosis	2+	n.a	PTB_SA_val020	non_UK_born	South Africa		No
GSM484546	21			Black		Female	LATENT TB			n.a	n.a	20	LTB_SA_val036	non_UK_born	South Africa		No
GSM484547	23			Black		Female	LATENT TB			n.a	n.a	18	LTB_SA_val042	non_UK_born	South Africa		No
GSM484548	19			Black		Female	LATENT TB			n.a	n.a	12	LTB_SA_val049	non_UK_born	South Africa		No
GSM484549	20			Black		Female	LATENT TB			n.a	n.a	14	LTB_SA_val050	non_UK_born	South Africa		No
GSM484550	23			Black		Female	LATENT TB			n.a	n.a	15	LTB_SA_val051	non_UK_born	South Africa		No
GSM484551	40	no_growth_6_weeks	nil	White	n.a	Male	PTB	True	Fully_sensitive	tuberculosis	nil	n.a	PTB_LON_test005_sep_Neut_002	non_UK_Born	London	Minimal	Yes	True
GSM484552	40	no_growth_6_weeks	nil	White	n.a	Male	PTB	True	Fully_sensitive	tuberculosis	nil	n.a	PTB_LON_test005_sep_Mono_003	non_UK_Born	London	Minimal	Yes	True
GSM484553	40	no_growth_6_weeks	nil	White	n.a	Male	PTB	True	Fully_sensitive	tuberculosis	nil	n.a	PTB_LON_test005_sep_CD4_004	non_UK_Born	London	Minimal	Yes	True
GSM484554	40	no_growth_6_weeks	nil	White	n.a	Male	PTB	True	Fully_sensitive	tuberculosis	nil	n.a	PTB_LON_test005_sep_CD8_005	non_UK_Born	London	Minimal	Yes	True
GSM484555	26	n.a	n.a	Asian other	n.a	Male	PTB	n.a	Resistant Isoniazid + Ethambu	tuberculosis	+	n.a	PTB_LON_test028_sep_Neut_022	non_UK_Born	London	Advanced	Not_Known	n.a
GSM484556	26	n.a	n.a	Asian other	n.a	Male	PTB	n.a	Resistant Isoniazid + Ethambu	tuberculosis	+	n.a	PTB_LON_test028_sep_Mono_023	non_UK_Born	London	Advanced	Not_Known	n.a
GSM484557	26	n.a	n.a	Asian other	n.a	Male	PTB	n.a	Resistant Isoniazid + Ethambu	tuberculosis	+	n.a	PTB_LON_test028_sep_CD4_024	non_UK_Born	London	Advanced	Not_Known	n.a
GSM484558	26	n.a	n.a	Asian other	n.a	Male	PTB	n.a	Resistant Isoniazid + Ethambu	tuberculosis	+	n.a	PTB_LON_test028_sep_CD8_025	non_UK_Born	London	Advanced	Not_Known	n.a
GSM484559	33	n.a	n.a	White	n.a	Male	PTB	n.a	Resistant Streptomycin, Ethio	tuberculosis	+++	21	PTB_LON_test007_sep_Neut_007	non_UK_Born	London	Moderate	Yes	n.a
GSM484560	33	n.a	n.a	White	n.a	Male	PTB	n.a	Resistant Streptomycin, Ethio	tuberculosis	+++	21	PTB_LON_test007_sep_Mono_008	non_UK_Born	London	Moderate	Yes	n.a
GSM484561	33	n.a	n.a	White	n.a	Male	PTB	n.a	Resistant Streptomycin, Ethio	tuberculosis	+++	21	PTB_LON_test007_sep_CD4_009	non_UK_Born	London	Moderate	Yes	n.a
GSM484562	33	n.a	n.a	White	n.a	Male	PTB	n.a	Resistant Streptomycin, Ethio	tuberculosis	+++	21	PTB_LON_test007_sep_CD8_010	non_UK_Born	London	Moderate	Yes	n.a
GSM484563	18	tuberculosis	nil	South Asian	n.a	Female	PTB	unknown	Fully_sensitive	tuberculosis	nil	20	PTB_LON_test023_sep_Neut_012	UK_Born	London	Advanced	Yes	n.a
GSM484564	18	tuberculosis	nil	South Asian	n.a	Female	PTB	unknown	Fully_sensitive	tuberculosis	nil	20	PTB_LON_test023_sep_Mono_013	UK_Born	London	Advanced	Yes	n.a
GSM484565	18	tuberculosis	nil	South Asian	n.a	Female	PTB	unknown	Fully_sensitive	tuberculosis	nil	20	PTB_LON_test023_sep_CD4_014	UK_Born	London	Advanced	Yes	n.a
GSM484566	18	tuberculosis	nil	South Asian	n.a	Female	PTB	unknown	Fully_sensitive	tuberculosis	nil	20	PTB_LON_test023_sep_CD8_015	UK_Born	London	Advanced	Yes	n.a
GSM484567	28	n.a	n.a	White	n.a	Male	Control (BCG+)	n.a	n.a	n.a	n.a	9	CON_LON_test035_sep_Neut_032	non_UK_Born	London	True	Yes	n.a
GSM484568	28	n.a	n.a	White	n.a	Male	Control (BCG+)	n.a	n.a	n.a	n.a	9	CON_LON_test035_sep_Mono_033	non_UK_Born	London	True	Yes	n.a
GSM484569	28	n.a	n.a	White	n.a	Male	Control (BCG+)	n.a	n.a	n.a	n.a	9	CON_LON_test035_sep_CD4_034	non_UK_Born	London	True	Yes	n.a
GSM484570	28	n.a	n.a	White	n.a	Male	Control (BCG+)	n.a	n.a	n.a	n.a	9	CON_LON_test035_sep_CD8_035	non_UK_Born	London	True	Yes	n.a
GSM484571	22	n.a	n.a	South Asian	n.a	Male	PTB	n.a	Fully_sensitive	tuberculosis	nil	15	PTB_LON_test027_sep_Neut_017	non_UK_Born	London	Moderate	Yes	n.a
GSM484572	22	n.a	n.a	South Asian	n.a	Male	PTB	n.a	Fully_sensitive	tuberculosis	nil	15	PTB_LON_test027_sep_Mono_018	non_UK_Born	London	Moderate	Yes	n.a
GSM484573	22	n.a	n.a	South Asian	n.a	Male	PTB	n.a	Fully_sensitive	tuberculosis	nil	15	PTB_LON_test027_sep_CD4_019	non_UK_Born	London	Moderate	Yes	n.a
GSM484574	22	n.a	n.a	South Asian	n.a	Male	PTB	n.a	Fully_sensitive	tuberculosis	nil	15	PTB_LON_test027_sep_CD8_020	non_UK_Born	London	Moderate	Yes	n.a
GSM484575	21	n.a	n.a	White	n.a	Male	Control (BCG+)	n.a	n.a	n.a	n.a	9	CON_LON_test036_sep_Neut_037	UK_Born	London	True	Yes	n.a
GSM484576	21	n.a	n.a	White	n.a	Male	Control (BCG+)	n.a	n.a	n.a	n.a	9	CON_LON_test036_sep_Mono_038	UK_Born	London	True	Yes	n.a
GSM484577	21	n.a	n.a	White	n.a	Male	Control (BCG+)	n.a	n.a	n.a	n.a	9	CON_LON_test036_sep_CD4_039	UK_Born	London	True	Yes	n.a
GSM484578	21	n.a	n.a	White	n.a	Male	Control (BCG+)	n.a	n.a	n.a	n.a	9	CON_LON_test036_sep_CD8_040	UK_Born	London	True	Yes	n.a
GSM484579	32	tuberculosis	nil	Black	n.a	Male	PTB	n.a	Fully_sensitive	tuberculosis	nil	23	PTB_LON_test032_sep_Neut_027	non_UK_Born	London	Moderate	Yes	n.a
GSM484580	32	tuberculosis	nil	Black	n.a	Male	PTB	n.a	Fully_sensitive	tuberculosis	nil	23	PTB_LON_test032_sep_Mono_028	non_UK_Born	London	Moderate	Yes	n.a
GSM484581	32	tuberculosis	nil	Black	n.a	Male	PTB	n.a	Fully_sensitive	tuberculosis	nil	23	PTB_LON_test032_sep_CD4_029	non_UK_Born	London	Moderate	Yes	n.a
GSM484582	32	tuberculosis	nil	Black	n.a	Male	PTB	n.a	Fully_sensitive	tuberculosis	nil	23	PTB_LON_test032_sep_CD8_030	non_UK_Born	London	Moderate	Yes	n.a
GSM484583	55	tuberculosis	nil	South Asian	n.a	Female	PTB	n.a	Fully_sensitive	n.a	n.a	n.a	PTB_LON_test049_sep_Neut_052	non_UK_Born	London	Advanced	Yes	n.a
GSM484584	55	tuberculosis	nil	South Asian	n.a	Female	PTB	n.a	Fully_sensitive	n.a	n.a	n.a	PTB_LON_test049_sep_Mono_053	non_UK_Born	London	Advanced	Yes	n.a
GSM484585	55	tuberculosis	nil	South Asian	n.a	Female	PTB	n.a	Fully_sensitive	n.a	n.a	n.a	PTB_LON_test049_sep_CD4_054	non_UK_Born	London	Advanced	Yes	n.a
GSM484586	55	tuberculosis	nil	South Asian	n.a	Female	PTB	n.a	Fully_sensitive	n.a	n.a	n.a	PTB_LON_test049_sep_CD8_055	non_UK_Born	London	Advanced	Yes	n.a
GSM484587	49	n.a	n.a	South Asian	n.a	Female	Control (BCG+)	n.a	n.a	n.a	n.a	0	CON_LON_test037_sep_Neut_042	non_UK_Born	London	True	Yes	n.a
GSM484588	49	n.a	n.a	South Asian	n.a	Female	Control (BCG+)	n.a	n.a	n.a	n.a	0	CON_LON_test037_sep_Mono_043	non_UK_Born	London	True	Yes	n.a
GSM484589	49	n.a	n.a	South Asian	n.a	Female	Control (BCG+)	n.a	n.a	n.a	n.a	0	CON_LON_test037_sep_CD4_044	non_UK_Born	London	True	Yes	n.a
GSM484590	49	n.a	n.a	South Asian	n.a	Female	Control (BCG+)	n.a	n.a	n.a	n.a	0	CON_LON_test037_sep_CD8_045	non_UK_Born	London	True	Yes	n.a
GSM484591	41	n.a	n.a	South Asian	n.a	Female	Control (BCG+)	n.a	n.a	n.a	n.a	10	CON_LON_test038_sep_Neut_047	non_UK_Born	London	True	Yes	n.a
GSM484592	41	n.a	n.a	South Asian	n.a	Female	Control (BCG+)	n.a	n.a	n.a	n.a	10	CON_LON_test038_sep_Mono_048	non_UK_Born	London	True	Yes	n.a
GSM484593	41	n.a	n.a	South Asian	n.a	Female	Control (BCG+)	n.a	n.a	n.a	n.a	10	CON_LON_test038_sep_CD4_049	non_UK_Born	London	True	Yes	n.a
GSM484594	41	n.a	n.a	South Asian	n.a	Female	Control (BCG+)	n.a	n.a	n.a	n.a	10	CON_LON_test038_sep_CD8_050	non_UK_Born	London	True	Yes	n.a
GSM484595	66	tuberculosis	+++	Black	n.a	Male	PTB	n.a	Resistant Isoniazid	n.a	n.a	23	PTB_LON_test001	non_UK_Born	London	Advanced	No	n.a
GSM484596	41	tuberculosis	++	Black	n.a	Male	PTB	n.a	Resistant Pyrazinamide	no_growth_6_weeks	nil	13	PTB_LON_test002	non_UK_Born	London	Advanced	Yes	n.a
GSM484597	40	tuberculosis	nil	Black	n.a	Female	PTB	n.a	Resistant Isoniazid	n.a	n.a	17	PTB_LON_test003	non_UK_Born	London	Minimal	Yes	n.a
GSM484598	58	n.a	n.a	White	n.a	Male	PTB	n.a	Fully_sensitive	tuberculosis	+++	n.a	PTB_LON_test004	UK_Born	London	Advanced	No	n.a
GSM484599	41	n.a	n.a	Asian other	Contact_Screen	Male	Latent	pulm	n.a	n.a	n.a	21	LTB_LON_test009	non_UK_Born	London	No disease	Yes	Sm+
GSM484600	35	n.a	n.a	White	Contact_Screen	Female	Latent	pulm	n.a	n.a	n.a	17	LTB_LON_test010	UK_Born	London	No disease	Yes	Sm+
GSM484601	28	n.a	n.a	South Asian	Not_Known	Male	Latent	n.a	n.a	n.a	n.a	23	LTB_LON_test012	non_UK_Born	London	No disease	No	n.a
GSM484602	53	n.a	n.a	Asian other	Contact_Screen	Female	Latent	unknown	n.a	no_growth_6_weeks	nil	20	LTB_LON_test013	non_UK_Born	London	No disease	Yes	n.a
GSM484603	28	n.a	n.a	White	n.a	Male	Control (BCG+)	n.a	n.a	n.a	n.a	9	CON_LON_test035	non_UK_Born	London	n.a	Yes	n.a
GSM484604	21	n.a	n.a	White	n.a	Male	Control (BCG+)	n.a	n.a	n.a	n.a	9	CON_LON_test036	UK_Born	London	n.a	Yes	n.a
GSM484605	40	no_growth_6_weeks	nil	White	n.a	Male	PTB	n.a	Fully_sensitive	tuberculosis	nil	n.a	PTB_LON_test005	non_UK_Born	London	Minimal	Yes	n.a
GSM484606	33	n.a	n.a	White	n.a	Male	PTB	n.a	Resistant Streptomycin, Ethio	tuberculosis	+++	21	PTB_LON_test007	non_UK_Born	London	Moderate	Yes	n.a
GSM484607	19	n.a	n.a	Black	Contact_Screen	Female	Latent	pulm	n.a	n.a	n.a	16	LTB_LON_test014	non_UK_Born	London	No disease	Yes	Sm+
GSM484608	20	n.a	n.a	Black	New_Entrant	Female	Latent	n.a	n.a	n.a	n.a	16	LTB_LON_test016	non_UK_Born	London	No disease	Yes	n.a
GSM484609	31	n.a	n.a	Other	Contact_Screen	Male	Latent	unknown	n.a	n.a	n.a	24	LTB_LON_test017	non_UK_Born	London	No disease	Yes	n.a
GSM484610	55	tuberculosis	nil	South Asian	n.a	Female	PTB	n.a	Fully_sensitive	n.a	n.a	n.a	PTB_LON_test049	non_UK_Born	London	Advanced	Yes	n.a
GSM484611	18	tuberculosis	nil	South Asian	n.a	Female	PTB	unknown	Fully_sensitive	tuberculosis	nil	20	PTB_LON_test023	UK_Born	London	Advanced	Yes	n.a
GSM484612	49	n.a	n.a	South Asian	n.a	Female	Control (BCG+)	n.a	n.a	n.a	n.a	0	CON_LON_test037	non_UK_Born	London	n.a	Yes	n.a
GSM484613	41	n.a	n.a	South Asian	n.a	Female	Control (BCG+)	n.a	n.a	n.a	n.a	10	CON_LON_test038	non_UK_Born	London	n.a	Yes	n.a
GSM484614	49	n.a	n.a	South Asian	Contact_Screen	Male	Latent	pulm	n.a	n.a	n.a	32	LTB_LON_test018	non_UK_Born	London	Minimal	Yes	unknown
GSM484615	45	n.a	n.a	White	Contact_Screen	Male	Latent	pulm	n.a	n.a	n.a	45	LTB_LON_test019	non_UK_Born	London	Moderate	Yes	Sm+
GSM484616	23	n.a	n.a	Black	New_Entrant	Male	Latent	n.a	n.a	n.a	n.a	28	LTB_LON_test020	non_UK_Born	London	No disease	Yes	n.a
GSM484617	26	n.a	n.a	Black	Contact_Screen	Male	Latent	pulm	n.a	n.a	n.a	17	LTB_LON_test021	non_UK_Born	London	No disease	Yes	Sm+
GSM484618	31	n.a	n.a	Black	n.a	Male	PTB	pulm	Resistant Streptomycin	tuberculosis	n.a	25	PTB_LON_test026	non_UK_Born	London	Minimal	Not_Known	unknown
GSM484619	22	n.a	n.a	South Asian	n.a	Male	PTB	n.a	Fully_sensitive	tuberculosis	nil	15	PTB_LON_test027	non_UK_Born	London	Moderate	Yes	n.a
GSM484620	26	n.a	n.a	Asian other	n.a	Male	PTB	n.a	Resistant Isoniazid + Ethambu	tuberculosis	+	n.a	PTB_LON_test028	non_UK_Born	London	Advanced	Not_Known	n.a
GSM484621	32	tuberculosis	nil	Black	n.a	Male	PTB	n.a	Fully_sensitive	tuberculosis	nil	23	PTB_LON_test032	non_UK_Born	London	Moderate	Yes	n.a
GSM484622	33	n.a	n.a	Black	n.a	Female	Control (BCG+)	n.a	n.a	n.a	n.a	5	CON_LON_test039	non_UK_Born	London	n.a	Yes	n.a
GSM484623	28	n.a	n.a	Black	n.a	Female	Control (BCG+)	n.a	n.a	n.a	n.a	13	CON_LON_test040	non_UK_Born	London	n.a	Yes	n.a
GSM484624	33	n.a	n.a	South Asian	Contact_Screen	Male	Latent	pulm	n.a	n.a	n.a	7	LTB_LON_test022	non_UK_Born	London	Minimal	No	unknown
GSM484625	29	n.a	n.a	Black	Not_Known	Male	Latent	n.a	n.a	n.a	n.a	12	LTB_LON_test024	non_UK_Born	London	No disease	No	n.a
GSM484626	44	n.a	n.a	Black	Contact_Screen	Female	Latent	pulm	n.a	n.a	n.a	18	LTB_LON_test025	non_UK_Born	London	No disease	Yes	unknown
GSM484627	24	n.a	n.a	White	Contact_Screen	Female	Latent	pulm	n.a	n.a	n.a	27	LTB_LON_test033	non_UK_Born	London	No disease	Yes	Sm+
GSM484628	34	tuberculosis	nil	Other	n.a	Female	PTB	n.a	Fully_sensitive	tuberculosis	nil	38	PTB_LON_test034	non_UK_Born	London	Moderate	Yes	n.a
GSM484629	75	n.a	n.a	South Asian	n.a	Male	PTB	n.a	Fully_sensitive	tuberculosis	nil	n.a	PTB_LON_test053	UK_Born	London	No disease	Not_Known	n.a
GSM484630	64	n.a	n.a	South Asian	n.a	Female	PTB	n.a	n.a	n.a	n.a	25	PTB_LON_test054	non_UK_Born	London	No disease	Not_Known	n.a
GSM484631	53	tuberculosis	+	White	n.a	Male	PTB	n.a	Fully_sensitive	tuberculosis	scanty	0	PTB_LON_test006	UK_Born	London	Advanced	Yes	n.a
GSM484632	23	n.a	n.a	White	n.a	Female	Control (BCG+)	n.a	n.a	n.a	n.a	5	CON_LON_test041	UK_Born	London	n.a	Yes	n.a
GSM484633	29	n.a	n.a	Other	n.a	Male	Control (BCG+)	n.a	n.a	n.a	n.a	6	CON_LON_test044	non_UK_Born	London	n.a	Yes	n.a
GSM484634	22	n.a	n.a	Asian other	n.a	Female	Control (BCG+)	n.a	n.a	n.a	n.a	0	CON_LON_test046	non_UK_Born	London	n.a	Yes	n.a
GSM484635	68	n.a	n.a	Black	Contact_Screen	Male	Latent	pulm	n.a	n.a	n.a	21	LTB_LON_test008	non_UK_Born	London	No disease	Yes	Sm+
GSM484636	24	n.a	n.a	Other	Contact_Screen	Female	Latent	pulm	n.a	n.a	n.a	21	LTB_LON_test011	non_UK_Born	London	No disease	Yes	Sm+
GSM484637	27	n.a	n.a	Asian other	Contact_Screen	Female	Latent	pulm	n.a	n.a	n.a	25	LTB_LON_test015	non_UK_Born	London	No disease	Yes	Sm+
GSM484638	28	n.a	n.a	White	n.a	Male	PTB	n.a	Fully_sensitive	tuberculosis	+	n.a	PTB_LON_test031	non_UK_Born	London	Advanced	Yes	n.a
GSM484639	54	n.a	n.a	White	n.a	Female	PTB	n.a	Fully_sensitive	tuberculosis	nil	0	PTB_LON_test050	UK_Born	London	No disease	Yes	n.a
GSM484640	60	n.a	n.a	South Asian	Contact_Screen	Female	Latent	pulm	n.a	n.a	n.a	21	LTB_LON_test043	non_UK_Born	London	No disease	Yes	Sm+
GSM484641	23	n.a	n.a	South Asian	n.a	Male	PTB	n.a	Fully_sensitive	tuberculosis	+	n.a	PTB_LON_test051	non_UK_Born	London	Moderate	Not_Known	n.a
GSM484642	78	n.a	n.a	White	n.a	Female	PTB	n.a	Fully_sensitive	tuberculosis	+	n.a	PTB_LON_test052	UK_Born	London	Minimal	Not_Known	n.a
GSM484643	42	n.a	n.a	Asian other	Contact_Screen	Female	Latent	pulm	n.a	n.a	n.a	30	LTB_LON_test029	non_UK_Born	London	No disease	Yes	Sm+
GSM484644	43	n.a	n.a	Black	n.a	Male	Control (BCG+)	n.a	n.a	n.a	n.a	12	CON_LON_test045	non_UK_Born	London	n.a	Yes	n.a
GSM484645	20	tuberculosis	nil	White	n.a	Female	PTB	n.a	Fully_sensitive	n.a	n.a	n.a	PTB_LON_test042	non_UK_Born	London	Minimal	Yes	n.a
GSM484646	41	n.a	n.a	Asian other	Contact_Screen	Female	Latent	pulm	n.a	n.a	n.a	26	LTB_LON_test030	non_UK_Born	London	No disease	Yes	Sm+
GSM484647	23	n.a	n.a	South Asian	n.a	Female	Control (BCG+)	n.a	n.a	n.a	n.a	0	CON_LON_test047	UK_Born	London	n.a	Yes	n.a
GSM484648	32	n.a	n.a	Asian other	n.a	Male	Control (BCG+)	n.a	n.a	n.a	n.a	14	CON_LON_test048	non_UK_Born	London	n.a	Yes	n.a
GSM549324	55			Caucasian		Male	Still						WB-Still-4639
GSM549325	22			Asian		Male	Still						WB-Still-5161
GSM549326	83			Caucasian		Male	Still						WB-Still-5163
GSM549327	42			Caucasian		Female	Still						WB-Still-5667
GSM549328	51			Caucasian		Male	Still						WB-Still-5666
GSM549329	19			Caucasian		Male	Still						WB-Still-1281
GSM549331	34			Caucasian		Male	Still						WB-Still-1102
GSM549333	38			Caucasian		Female	Still						WB-Still-1934
GSM549335	48			Hispanic		Female	Still						WB-Still-1935
GSM549336	54			Caucasian		Male	Still						WB-Still-1936
GSM549338	29			Caucasian		Female	Still						WB-Still-2166
GSM549340	37			Native American		Female	Still						WB-Still-2358
GSM549342	17			Caucasian		Male	Still						WB-Still-2362
GSM549344	64			Caucasian		Female	Still						WB-Still-5870
GSM549345	31			Caucasian		Male	Still						WB-Still-5871
GSM549346	70			Caucasian		Male	Still						WB-Still-5872
GSM549347	27			Caucasian		Male	Still						WB-Still-6038
GSM549348	63			Native American		Female	Still						WB-Still-6167
GSM549349	38			Hispanic		Female	Still						WB-Still-6168
GSM549350	44			Caucasian		Female	Still						WB-Still-6037
GSM549351	32			Hispanic		Female	Still						WB-Still-8980
GSM549352	26			Caucasian		Male	Still						WB-Still-7760
GSM549353	19			Caucasian		Male	Still						WB-Still-8560
GSM549354	48			Hispanic		Female	Still						WB-Still-6652
GSM549355	19			Caucasian		Male	Still						WB-Still-6653
GSM549356	59			Caucasian		Male	Still						WB-Still-7759
GSM549357	54			Caucasian		Male	Still						WB-Still-8059
GSM549358	36			Caucasian		Female	ASLE						WB-ASLE-5320
GSM549359	36			Caucasian		Female	ASLE						WB-ASLE-5321
GSM549360	79			Caucasian		Female	ASLE						WB-ASLE-5670
GSM549361	29			Asian		Female	ASLE						WB-ASLE-5671
GSM549362	30			Caucasian		Female	ASLE						WB-ASLE-6066
GSM549363	45			African American		Female	ASLE						WB-ASLE-6067
GSM549364	28			Hispanic		Male	ASLE						WB-ASLE-6068
GSM549365	53			Caucasian		Female	ASLE						WB-ASLE-6643
GSM549366	28			Caucasian		Female	ASLE						WB-ASLE-6644
GSM549367	28			Asian		Female	ASLE						WB-ASLE-6069
GSM549368	20			African American		Female	ASLE						WB-ASLE-6070
GSM549369	38			African American		Female	ASLE						WB-ASLE-6071
GSM549370	31			Caucasian		Male	ASLE						WB-ASLE-6641
GSM549371	46			Hispanic		Female	ASLE						WB-ASLE-6642
GSM549372	37			Caucasian		Female	ASLE						WB-ASLE-6650
GSM549373	49			Caucasian		Female	ASLE						WB-ASLE-6645
GSM549374	33			Hispanic		Female	ASLE						WB-ASLE-6646
GSM549375	50			Caucasian		Female	ASLE						WB-ASLE-6647
GSM549376	18			Caucasian		Female	ASLE						WB-ASLE-7984
GSM549377	24			Caucasian		Female	ASLE						WB-ASLE-7985
GSM549378	49			African American		Female	ASLE						WB-ASLE-7987
GSM549379	52			Caucasian		Male	ASLE						WB-ASLE-7988
GSM549380	50			Caucasian		Female	ASLE						WB-ASLE-7989
GSM549381	35			African American		Female	ASLE						WB-ASLE-7990
GSM549382	21			Hispanic		Male	ASLE						WB-ASLE-2773
GSM549383	48			Hispanic		Female	ASLE						WB-ASLE-7995
GSM549384	34			African American		Female	ASLE						WB-ASLE-8178
GSM549385	51			Caucasian		Female	ASLE						WB-ASLE-8174
GSM549386	15			Hispanic		Male	PSLE						WB-PSLE-5947
GSM549387	16			Hispanic		Female	PSLE						WB-PSLE-5953
GSM549388	13			Caucasian		Female	PSLE						WB-PSLE-5949
GSM549389	15			Hispanic		Female	PSLE						WB-PSLE-5970
GSM549390	17			Asian		Female	PSLE						WB-PSLE-5980
GSM549391	16			Caucasian		Male	PSLE						WB-PSLE-7456
GSM549392	14			Hispanic		Female	PSLE						WB-PSLE-7457
GSM549393	17			Hispanic		Female	PSLE						WB-PSLE-7458
GSM549394	17			Hispanic		Female	PSLE						WB-PSLE-7459
GSM549395	17			African American		Female	PSLE						WB-PSLE-5610
GSM549396	16			Caucasian		Female	PSLE						WB-PSLE-5611
GSM549397	15			African American		Female	PSLE						WB-PSLE-5612
GSM549398	17			Hispanic		Female	PSLE						WB-PSLE-5624
GSM549399	18			Hispanic		Female	PSLE						WB-PSLE-5626
GSM549400	14			Hispanic		Male	PSLE						WB-PSLE-5933
GSM549401	17			Hispanic		Female	PSLE						WB-PSLE-5623
GSM549402	16			Hispanic		Female	PSLE						WB-PSLE-5932
GSM549403	17			Hispanic		Female	PSLE						WB-PSLE-5944
GSM549404	14			Hispanic		Male	PSLE						WB-PSLE-5945
GSM549405	16			African American		Female	PSLE						WB-PSLE-7466
GSM549406	15			African American		Female	PSLE						WB-PSLE-7471
GSM549407	14			Hispanic		Female	PSLE						WB-PSLE-7465
GSM549408	16			Hispanic		Female	PSLE						WB-PSLE-7486
GSM549409	16			Caucasian		Female	PSLE						WB-PSLE-5608
GSM549410	17			African American		Female	PSLE						WB-PSLE-5600
GSM549411	17			Hispanic		Male	PSLE						WB-PSLE-5613
GSM549412	17			Hispanic		Female	PSLE						WB-PSLE-5614
GSM549413	17			Hispanic		Female	PSLE						WB-PSLE-5615
GSM549414	16			African American		Female	PSLE						WB-PSLE-5618
GSM549415	16			African American		Female	PSLE						WB-PSLE-5954
GSM549416	13			Hispanic		Male	PSLE						WB-PSLE-5952
GSM549417	15			Hispanic		Female	PSLE						WB-PSLE-8933
GSM549418	13			Caucasian		Female	PSLE						WB-PSLE-5627
GSM549419	29			Caucasian		Female	Still						WB-Still-9678
GSM549420	25			Caucasian		Female	Still						WB-Still-9686
GSM549421	6			Hispanic		Female	Staph						WB-Staph-1340
GSM549422	9			Caucasian		Male	Staph						WB-Staph-1342
GSM549423	6			African American		Female	Staph						WB-Staph-1343
GSM549424	11			Caucasian		Male	Staph						WB-Staph-1344
GSM549425	15			African American		Male	Staph						WB-Staph-1345
GSM549426	5			African American		Male	Staph						WB-Staph-1402
GSM549427	13			Caucasian		Male	Staph						WB-Staph-1346
GSM549428	3			Hispanic		Male	Staph						WB-Staph-1347
GSM549429	11			Caucasian		Female	Staph						WB-Staph-5825
GSM549430	17			Hispanic		Male	Staph						WB-Staph-5827
GSM549431	4			Hispanic		Female	Staph						WB-Staph-5839
GSM549432	5			African American		Male	Staph						WB-Staph-5840
GSM549433	1			Hispanic		Female	Staph						WB-Staph-1338
GSM549434	9			African American		Male	Staph						WB-Staph-1339
GSM549435	1			African American		Female	Strep						WB-Strep-5800
GSM549436	5			Hispanic		Female	Strep						WB-Strep-5808
GSM549437	6			Asian		Female	Strep						WB-Strep-5813
GSM549438	14			African American		Male	Strep						WB-Strep-5838
GSM549439	5			Hispanic		Female	Strep						WB-Strep-6549
GSM549440	7			Caucasian		Male	Strep						WB-Strep-8854
GSM549441	1			Hispanic		Male	Strep						WB-Strep-2736
GSM549442	6			Hispanic		Male	Strep						WB-Strep-9483
GSM549443	5			Caucasian		Female	Strep						WB-Strep-9484
GSM549444	16			Caucasian		Male	Strep						WB-Strep-5781
GSM549445	1			Hispanic		Female	Strep						WB-Strep-8869
GSM549446	1			Caucasian		Male	Strep						WB-Strep-5074
GSM549447	10			Caucasian		Female	Staph						WB-Staph-2707
GSM549448	3			African American		Male	Staph						WB-Staph-2388
GSM549449	2			Hispanic		Female	Staph						WB-Staph-5068
GSM549450	11			African American		Male	Staph						WB-Staph-5040
GSM549451	10			Hispanic		Female	Staph						WB-Staph-9598
GSM549452	1			African American		Male	Staph						WB-Staph-9601
GSM549453	8			Hispanic		Female	Staph						WB-Staph-9548
GSM549454	2			African American		Male	Staph						WB-Staph-9553
GSM549455	8			African American		Female	Staph						WB-Staph-9552
GSM549456	0			African American		Female	Staph						WB-Staph-9555
GSM549457	1			Caucasian		Female	Staph						WB-Staph-9556
GSM549458	7			African American		Female	Staph						WB-Staph-9569
GSM549459	9			African American		Male	Staph						WB-Staph-5064
GSM549460	11			Hispanic		Male	Staph						WB-Staph-5046
GSM549461	1			African American		Male	Staph						WB-Staph-9558
GSM549462	6			Hispanic		Female	Staph						WB-Staph-9559
GSM549463	2			African American		Female	Staph						WB-Staph-9560
GSM549464	10			African American		Female	Staph						WB-Staph-9561
GSM549465	11			African American		Male	Staph						WB-Staph-9562
GSM549466	12			Caucasian		Male	Staph						WB-Staph-2741
GSM549467	5			African American		Female	Staph						WB-Staph-9549
GSM549468	1			Hispanic		Female	Staph						WB-Staph-9557
GSM549469	15			Caucasian		Male	Staph						WB-Staph-5069
GSM549470	8			Hispanic		Female	Staph						WB-Staph-5037
GSM549471	12			African American		Female	Staph						WB-Staph-2745
GSM549472	13			Caucasian		Male	Staph						WB-Staph-9565
GSM549473	58			Caucasian		Female	Still						WB-Still-5986
GSM549474	35			Asian		Female	Still						WB-Still-5985
GSM549475	12			Hispanic		Female	PSLE						WB-PSLE-5982
GSM549476	18			Caucasian		Female	PSLE						WB-PSLE-6156
GSM549477	12			Hispanic		Female	PSLE						WB-PSLE-9870
GSM549478	13			African American		Female	PSLE						WB-PSLE-7393
GSM549479	14			Hispanic		Female	PSLE						WB-PSLE-2925
GSM549480	9			Hispanic		Female	PSLE						WB-PSLE-1914
GSM549481	18			Caucasian		Female	PSLE						WB-PSLE-2145
GSM549482	18			Hispanic		Female	PSLE						WB-PSLE-3193
GSM549483	16			Hispanic		Female	PSLE						WB-PSLE-0067
GSM549484	18			Hispanic		Female	PSLE						WB-PSLE-2526
GSM549485	14			Hispanic		Female	PSLE						WB-PSLE-2552
GSM549486	17			Caucasian		Female	PSLE						WB-PSLE-2546
GSM549487	18			Hispanic		Female	PSLE						WB-PSLE-2610
GSM549488	10			African American		Female	PSLE						WB-PSLE-8148
GSM549489	17			African American		Female	PSLE						WB-PSLE-6166
GSM549490	7			African American		Male	PSLE						WB-PSLE-8943
GSM549491	18			Hispanic		Female	PSLE						WB-PSLE-8074
GSM549492	18			African American		Female	PSLE						WB-PSLE-8152
GSM549493	15			Hispanic		Female	PSLE						WB-PSLE-0481
GSM549494	16			Hispanic		Female	PSLE						WB-PSLE-0683
GSM549495	16			Hispanic		Male	PSLE						WB-PSLE-8955
GSM549496	15			Asian		Female	PSLE						WB-PSLE-8956
GSM549497	18			African American		Female	PSLE						WB-PSLE-8965
GSM549498	18			African American		Female	PSLE						WB-PSLE-7469
GSM549499	17			Hispanic		Female	PSLE						WB-PSLE-7474
GSM549500	14			Hispanic		Female	PSLE						WB-PSLE-2408
GSM549501	15			Asian		Female	PSLE						WB-PSLE-2418
GSM549502	13			Hispanic		Male	PSLE						WB-PSLE-5583
GSM549503	19			Hispanic		Female	PSLE						WB-PSLE-5587
GSM549504	11			African American		Female	PSLE						WB-PSLE-5622
GSM549505	9			Hispanic		Male	PSLE						WB-PSLE-6298
GSM549506	11			Hispanic		Female	PSLE						WB-PSLE-8144
GSM549507	18			Asian		Female	PSLE						WB-PSLE-7384
GSM549508	11			Caucasian		Female	PSLE						WB-PSLE-5657
GSM549509	8			Caucasian		Female	PSLE						WB-PSLE-6029
GSM549510	15			Hispanic		Male	PSLE						WB-PSLE-6055
GSM549511	18			African American		Male	PSLE						WB-PSLE-6165
GSM549512	8			Hispanic		Female	PSLE						WB-PSLE-2938
GSM549513	16			Hispanic		Female	PSLE						WB-PSLE-2416
GSM549514	10			Hispanic		Female	PSLE						WB-PSLE-2919
GSM549515	12			Caucasian		Female	PSLE						WB-PSLE-9632
GSM549516	11			Caucasian		Female	PSLE						WB-PSLE-2420
GSM549517	16			Hispanic		Female	PSLE						WB-PSLE-1515
GSM549518	13			Hispanic		Male	PSLE						WB-PSLE-0581
GSM549519	17			African American		Female	PSLE						WB-PSLE-1916
GSM549520	14			African American		Female	PSLE						WB-PSLE-0582
GSM549521	13			African American		Female	PSLE						WB-PSLE-5951
GSM549522	12			Hispanic		Female	PSLE						WB-PSLE-9872
GSM549523	13			Hispanic		Female	PSLE						WB-PSLE-8411
GSM550320	28			Caucasian		Female							WB-H-2862						Still
GSM550321	28			Caucasian		Female							WB-H-2863						Still
GSM550322	24			Caucasian		Female							WB-H-6459						Still
GSM550323	33			Caucasian		Female							WB-H-6422						Still
GSM550324	38			Caucasian		Female							WB-H-2292						Still
GSM550325	29			Caucasian		Female							WB-H-2293						Still
GSM550326	25			Caucasian		Male							WB-H-2865						Still
GSM550327	35			Caucasian		Male							WB-H-6393						Still
GSM550328	27			Caucasian		Male							WB-H-5685						Still
GSM550329	38			Caucasian		Male							WB-H-2289						Still
GSM550330	49			Caucasian		Female							WB-H-2290						Still
GSM550331	27			Caucasian		Male							WB-H-2864						Still
GSM550332	35			Asian		Male							WB-H-5684						Still
GSM550333	29			Caucasian		Female							WB-H-5682						Still
GSM550334	43			Caucasian		Male							WB-H-5556						Still
GSM550335	20			Caucasian		Female							WB-H-6725						Still
GSM550336	30			Caucasian		Male							WB-H-6726						Still
GSM550337	50			Caucasian		Female							WB-H-6635						Still
GSM550338	44			Caucasian		Female							WB-H-6639						Still
GSM550339	58			Caucasian		Male							WB-H-6680						Still
GSM550340	31			Caucasian		Female							WB-H-6724						Still
GSM550341	53			Caucasian		Female							WB-H-1051						ASLE
GSM550342	45			Caucasian		Female							WB-H-1052						ASLE
GSM550343	55			Caucasian		Female							WB-H-1055						ASLE
GSM550344	43			Caucasian		Female							WB-H-1074						ASLE
GSM550345	43			Caucasian		Female							WB-H-1081						ASLE
GSM550346	42			Caucasian		Female							WB-H-7466						ASLE
GSM550347	57			Caucasian		Female							WB-H-7975						ASLE
GSM550348	51			Caucasian		Female							WB-H-4260						ASLE
GSM550349	74			Caucasian		Female							WB-H-3339						ASLE
GSM550350	43			Caucasian		Male							WB-H-4259						ASLE
GSM550351	84			Caucasian		Female							WB-H-4556						ASLE
GSM550352	37			Caucasian		Female							WB-H-7831						ASLE
GSM550353	39			Hispanic		Female							WB-H-7832						ASLE
GSM550354	35			Asian		Female							WB-H-7833						ASLE
GSM550355	45			Caucasian		Male							WB-H-7835						ASLE
GSM550356	43			Caucasian		Female							WB-H-7836						ASLE
GSM550357	43			Caucasian		Female							WB-H-7837						ASLE
GSM550358	14			Hispanic		Female							WB-H-1359						pSLE
GSM550359	15			Caucasian		Female							WB-H-1595						pSLE
GSM550360	14			Hispanic		Male							WB-H-2804-2						pSLE
GSM550361	16			Hispanic		Female							WB-H-5679-2						pSLE
GSM550362	17			Afican American		Female							WB-H-6035						pSLE
GSM550363	16			Caucasian		Female							WB-H-6411						pSLE
GSM550364	16			Hispanic		Female							WB-H-2812						pSLE
GSM550365	16			Hispanic		Male							WB-H-2806						pSLE
GSM550366	11			Afican American		Male							WB-H-2818						Strep and Staph
GSM550367	7			Hispanic		Male							WB-H-9128						Strep and Staph
GSM550368	8			Caucasian		Male							WB-H-0565						Strep and Staph
GSM550369	6			Hispanic		Female							WB-H-0545						Strep and Staph
GSM550370	10			Hispanic		Female							WB-H-2811						Strep and Staph
GSM550371	5			Hispanic		Male							WB-H-2704						Strep and Staph
GSM550372	8			Hispanic		Male							WB-H-9361						Strep and Staph
GSM550373	15			Hispanic		Female							WB-H-9363						Strep and Staph
GSM550374	18			Hispanic		Male							WB-H-9369						Strep and Staph
GSM550375	5			Hispanic		Male							WB-H-9355						Strep and Staph
GSM550376	6			Hispanic		Female							WB-H-9357						Strep and Staph
GSM550377	17			Hispanic		Male							WB-H-9371						Strep and Staph
GSM550378	4			Caucasian		Female							WB-H-9868						Strep and Staph
GSM550379	8			Hispanic		Female							WB-H-1134						Strep and Staph
GSM550380	12			Afican American		Female							WB-H-0853						Strep and Staph
GSM550381	4			Afican American		Female							WB-H-5851						Strep and Staph
GSM550382	10			Afican American		Female							WB-H-1358						Strep and Staph
GSM550383	8			Caucasian/Asian		Male							WB-H-0537						Strep and Staph
GSM550384	7			Caucasian		Male							WB-H-8550						Strep and Staph
GSM550385	5			Afican American		Male							WB-H-1946						Strep and Staph
GSM550386	5			Hispanic		Male							WB-H-1254						Strep and Staph
GSM550387	6			Afican American		Female							WB-H-2819						Strep and Staph
GSM550388	7			Caucasian		Male							WB-H-4276						Strep and Staph
GSM550389	24			Asian		Female							WB-H-5683						Still
GSM550390	16			Hispanic		Female							WB-H-5679						pSLE
GSM550391	14			Hispanic		Male							WB-H-2804						pSLE
GSM550392	14			Hispanic		Female							WB-H-1136						pSLE
GSM550393	11			Hispanic		Male							WB-H-1137						pSLE
GSM550394	9			Asian		Female							WB-H-1149						pSLE
GSM550395	10			Afican American		Female							WB-H-1358-2						pSLE
GSM550396	10			Hispanic		Female							WB-H-2811-2						pSLE
GSM550397	17			Hispanic		Female							WB-H-7254						pSLE
GSM550398	18			Caucasian		Female							WB-H-2846						pSLE
GSM550399	14			Afican American		Male							WB-H-2817						pSLE
GSM550400	18			Afican American		Female							WB-H-4637						pSLE

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