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Clinical

Expression profiling by array-GSE56490

Purpose

We used microarrays to investigate the global program of gene expression in human differentiating monocytes in the presence of the bio-active from of vitamin D.

Hypothesis

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Experimental Design

Human CD14+ monocytes were isolated from PBMCs of healhty donors and cultured in the presence of 1,25(OH)2D3 (10-8M) or ethanol for 4h or 24h. Total RNA was then isolated and analyzed by microarray. Four monocytic preparations from different healthy donors were used.

Experimental Variables

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Controls

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Methods

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Additional Information

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Microarray
Affymetrix HuGene 1.0 ST v1
16 Samples Loaded: 16
Human (Homo sapiens)
Monocytes , Monocyte-derived macrophages (MDMs) , Macrophages
Healthy
Sample Set Spreadsheet
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Samples Preview
Sample ID !Sample_title cell type Grouping
GSM1362464 Differentiating monocytes at 4h-CTR rep1 PBMCs from buffy coats Control 4 h
GSM1362465 Differentiating monocytes at 24h-CTR rep1 PBMCs from buffy coats Control 24 h
GSM1362466 Differentiating monocytes at 4h-VD rep1 PBMCs from buffy coats Vit D 4 h
GSM1362467 Differentiating monocytes at 24h-VD rep1 PBMCs from buffy coats Vit D 24 h
GSM1362468 Differentiating monocytes at 4h-CTR rep2 PBMCs from buffy coats Control 4 h
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File
sampleset4000005_sampleannotations.csv
Sample Set Spreadsheet
Log2 Transformed
Raw Signal
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Sample ID !Sample Title Cell type Grouping
GSM1362464
Differentiating monocytes at 4h-CTR rep1
PBMCs from buffy coats
Control 4 h
GSM1362465
Differentiating monocytes at 24h-CTR rep1
PBMCs from buffy coats
Control 24 h
GSM1362466
Differentiating monocytes at 4h-VD rep1
PBMCs from buffy coats
Vit D 4 h
GSM1362467
Differentiating monocytes at 24h-VD rep1
PBMCs from buffy coats
Vit D 24 h
GSM1362468
Differentiating monocytes at 4h-CTR rep2
PBMCs from buffy coats
Control 4 h
GSM1362469
Differentiating monocytes at 24h-CTR rep2
PBMCs from buffy coats
Control 24 h
GSM1362470
Differentiating monocytes at 4h-VD rep2
PBMCs from buffy coats
Vit D 4 h
GSM1362471
Differentiating monocytes at 24h-VD rep2
PBMCs from buffy coats
Vit D 24 h
GSM1362472
Differentiating monocytes at 4h-CTR rep3
PBMCs from buffy coats
Control 4 h
GSM1362473
Differentiating monocytes at 24h-CTR rep3
PBMCs from buffy coats
Control 24 h
GSM1362474
Differentiating monocytes at 4h-VD rep3
PBMCs from buffy coats
Vit D 4 h
GSM1362475
Differentiating monocytes at 24h-VD rep3
PBMCs from buffy coats
Vit D 24 h
GSM1362476
Differentiating monocytes at 4h-CTR rep4
PBMCs from buffy coats
Control 4 h
GSM1362477
Differentiating monocytes at 24h-CTR rep4
PBMCs from buffy coats
Control 24 h
GSM1362478
Differentiating monocytes at 4h-VD rep4
PBMCs from buffy coats
Vit D 4 h
GSM1362479
Differentiating monocytes at 24h-VD rep4
PBMCs from buffy coats
Vit D 24 h

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