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SIDRA

GXB

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Description

Genome-wide analysis of monocytes and T cells' response to interferon beta-GSE34627

Purpose

To characterized the IFN-? transcriptional response in monocytes, a small but influential cell-subset, using gene expression profile and pathway analysis.

Hypothesis

The unique expression profile of monocytes in response to Interferon-beta (IFN-?) might be masked by the response profile of the more abundant T cells.

Experimental Design

Monocytes and T lymphocytes were isolated from 3 healthy volunteers. For each sample the expression profile of untreated cells was compared to the profile of IFN-? treated cells, i.e. 4 samples from each donor (2 cell types, with and without treatment), 12 samples total.

Additional Information
  • Henig N, Avidan N, Mandel I, Staun-Ram E et al. Interferon-beta induces distinct gene expression response patterns in human monocytes versus T cells.PLoS One 2013;8(4):e62366. PMID: 23626809
  • Platform Illumina HumanWG-6 v3
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    sampleset4000093_sampleannotations.csv

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